ratio(CNAnorm)
ratio()所属R语言包:CNAnorm
Methods for Function ratio in Package ‘CNAnorm’
功能比方法包CNAnorm
译者:生物统计家园网 机器人LoveR
描述----------Description----------
ratio returns the Test/Normal ratio from an object of class CNAnorm. ratio is corrected for GC content if gcNorm was called.
ratio类CNAnorm对象返回的测试/正常比例。如果gcNorm被称为GC含量比纠正。
ratio.n returns the Test/Normal normalized ratio from an object of class CNAnorm after normalization. Its input is ratio(object)
ratio.n类CNAnorm标准化后的对象返回测试/标准化比值正常。其输入是ratio(object)
ratio.s returns the Test/Normal smoothed ratio from an object of class CNAnorm Its input is ratio(object)
ratio.s返回一个类对象测试/平滑比正常CNAnorm它的输入是ratio(object)
ratio.s.n returns the Test/Normal smoothed and normalized ratio from an object of class CNAnorm. Its input is ratio.s(object)
ratio.s.n类CNAnorm对象返回的测试/正常平滑和标准化比值。其输入是ratio.s(object)
segMean returns the mean of the segments as produced by DNACopy
segMean返回段的平均值,作为由DNACopy生产
segMean.n returns the normalized mean of the segments
segMean.n返回段的规范化平均
用法----------Usage----------
ratio(object)
ratio.n(object)
ratio.s(object)
ratio.s.n(object)
segMean(object)
segMean.n(object)
参数----------Arguments----------
参数:object
An object of Class "CNAnorm"
一个对象的类"CNAnorm"
值----------Value----------
A numeric vector
一个数值向量
作者(S)----------Author(s)----------
Stefano Berri <s.berri@leeds.ac.uk>
参见----------See Also----------
gcNorm, CNAnorm-class, DNAcopy
gcNorm,CNAnorm-class,DNAcopy
举例----------Examples----------
data(LS041)
CN <- dataFrame2object(LS041)
ratio.original <- ratio(CN)
CN.gcNorm <- gcNorm(CN, exclude = c("chrX", "chrY", "chrM"))
ratio.gc.corrected <- ratio(CN.gcNorm)
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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