plot.trioLR(trio)
plot.trioLR()所属R语言包：trio
Plotting for trioLR Objects
绘制trioLR对象
译者：生物统计家园网 机器人LoveR
描述----------Description----------
Plots the logic trees or information on the visited models generated in a the trio logic regression analyis with trioLR.
图逻辑树或信息的访问模型中产生的三重奏的逻辑回归analyis与trioLR。
用法----------Usage----------
## S3 method for class 'trioLR'
plot(x, whichTree = NA, freqType = 1, useNames = FALSE,
addStats = TRUE, digits = 3, main = NULL, cexOper=1.5,
cexLeaf=1.5, sizeLeaf=7, cexPar=1.3, ...)
参数----------Arguments----------
参数：x
an object of class trioLR, i.e.\ the output of trioLR.
类的一个对象trioLR，即\输出trioLR。
参数：whichTree
positive integer specifying the model for which the logic tree should be plotted when several trio logic regression models with different maximum numbers of leaves have been fitted. Ignored if just one model has been fitted using simulated annealing or MCMC has been employed to perform a Trio Logic Regression.
正整数，指定模型的逻辑树时，应绘制三人逻辑回归模型的几个不同的最大叶片数已安装。如果只有一个已安装使用模拟退火或MCMC已被用来执行三重逻辑回归模型忽略。
参数：freqType
positive integer between 1 and 3 specifying which statistics from the MC Trio Logic Regression analysis should be plotted. If freqType = 1, then for each variable, the percentage of models visited (after the burn-in) in the MCMC chain that contain this variable will be plotted. If freqType = 2, then for each pair of variables, this percentage will be shown. If freqType = 3, then for each pair of variables, the observed-to-expected ratio for being jointly in the models will be plotted. Ignored if simulated annealing or the greedy algorithm was used in the application of trioLR.
在1和3之间的正整数，指定哪些MC三重逻辑回归分析的统计数据应被绘制。如果freqType = 1，然后为每个变量，模型的百分比访问（老化后）包含这个变量将被绘制在MCMC链。如果freqType = 2，然后为每个变量对，这一比例将被显示。如果freqType = 3，然后为每个对变量，共同模型中观测到预期的比率将被绘制。如果忽略模拟退火或贪婪算法中使用的应用trioLR。
参数：useNames
should the names of the variables be used in the plots? If FALSE, the index of the column is shown.
应的变量的名称被用于在图？如果FALSE，示出的列的索引。
参数：addStats
should the coefficient in the trio logic regression model and the score for the fitted model be shown in the plot? Ignored if MCMC has been used in trioLR.
三人逻辑回归模型拟合模型的得分系数中的图吗？被忽略如果MCMC已被用于trioLR。
参数：digits
number of digits used in the presentation of the coefficient and score (see addStats). Ignored if addStats = FALSE or MCMC has been used in trioLR.
系数和得分演示文稿中使用的数字（见addStats“）。如果忽略addStats = FALSE或MCMC已被用于trioLR。
参数：main
character string specifying the title that should be added to the plot. If NULL, a standard title will be added to the plot.
字符串指定的标题应该被添加到图。 NULL如果，一个标准的标题将被添加到图。
参数：cexOper
the relative size of the AND- and OR-operators in the plotting of the logic tree. Ignored if MCMC has been used in trioLR.
的AND和OR运营商在绘制逻辑树的相对大小。被忽略如果MCMC已被用于trioLR。
参数：cexLeaf
the relative size of the variable names shown in the logic tree. Ignored if MCMC has been used in trioLR.
所述逻辑树中所示的变量名的相对大小。被忽略如果MCMC已被用于trioLR。
参数：sizeLeaf
the relative size of the boxes representing the leaves in the logic trees. Ignored if MCMC has been used in trioLR.
的相对大小的框表示在逻辑树的叶子。被忽略如果MCMC已被用于trioLR。
参数：cexPar
the relative size of the coefficient and the score (see addStats) when plotting the logic tree. Ignored if addStats = FALSE or if MCMC has been used in trioLR.
系数和得分的相对大小（见addStats）绘图时的逻辑树。如果忽略addStats = FALSE或MCMC已被用于trioLR。
参数：...
ignored.
忽略不计。
（作者）----------Author(s)----------
Holger Schwender, <a href="mailto:holger.schwender@udo.edu">holger.schwender@udo.edu</a>, based on the <code>plot</code> functions
implemented by Ingo Ruczinski and Charles Kooperberg in the <code>R</code> package <code>LogicReg</code>.
参考文献----------References----------
Genetic Epidemiology, 28, 157-170.
Liang, K.Y., Pulver, A.E., and Ruczinski, I. (2010). Detection of SNP-SNP Interactions in Trios of Parents with Schizophrenic Children. Genetic Epidemiology, 34, 396-406.
Graphical Statistics, 12, 475-511.
参见----------See Also----------
trioLR
trioLR
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
注2：由于是机器人自动翻译，难免有不准确之处，使用时仔细对照中、英文内容进行反复理解，可以帮助R语言的学习。
注3：如遇到不准确之处，请在本贴的后面进行回帖，我们会逐渐进行修订。
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发表于 2012-10-1 12:06:16
