plot.xcmsEIC(xcms)
plot.xcmsEIC()所属R语言包：xcms
Plot extracted ion chromatograms from multiple files
图从多个文件中提取离子色谱图
译者：生物统计家园网 机器人LoveR
描述----------Description----------
Batch plot a list of extracted ion chromatograms to the current graphics device.
一批图当前图形设备列表中提取离子色谱。
参数----------Arguments----------
参数：x
the xcmsEIC object
xcmsEIC对象
参数：y
optional xcmsSet object with peak integration data
可选的xcmsSet峰积分数据对象
参数：groupidx
either character vector with names or integer vector with indicies of peak groups for which to plot EICs
无论名称或峰组的序号为整数向量的特征向量绘制EICs的
参数：sampleidx
either character vector with names or integer vector with indicies of samples for which to plot EICs
或者名称或样品序号为整数向量的特征向量绘制EICs
参数：rtrange
a two column matrix with minimum and maximum retention times between which to return EIC data points if it has the same number of rows as the number groups in the xcmsEIC object, then sampleidx is used to subset it. otherwise, it is repeated over the length of sampleidx it may also be a single number specifying the time window around the peak for which to plot EIC data
最大和最小的保留时间与两列矩阵之间的返回数据点三电，如果有行作为xcmsEIC对象数量相同数量，然后sampleidx子集，它用于。否则，重复以上的长度sampleidx“它也可能是单数，绘制三电数据的峰值附近的指定时间窗口
参数：col
color to use for plotting extracted ion chromatograms. if missing and y is specified, colors are taken from unclass(sampclass(y)) and the default palette if it is the same length as the number groups in the xcmsEIC object, then sampleidx is used to subset it. otherwise, it is repeated over the length of sampleidx
用于绘制提取离子色谱的颜色。如果缺少“y指定颜色从unclass(sampclass(y))”默认调色板，如果它是作为xcmsEIC对象数量的长度相同，然后sampleidx使用子集它。否则，它会反复了sampleidx长度
参数：legtext
text to use for legend. if NULL and y is specified, legend text is taken from the sample class information found in the xcmsSet
使用文字的传说。如果NULL和y指定图例文本从样品类xcmsSet发现信息
参数：peakint
logical, plot integrated peak area with darkened lines (requires that y also be specified)
逻辑，图与黑暗系的综合峰面积（要求y也可以指定）
参数：sleep
seconds to pause between plotting EICs
秒图EICs之间的暂停
参数：...
other graphical parameters
其他图形参数
值----------Value----------
A xcmsSet object.
一个xcmsSet对象。
方法----------Methods----------
plot.xcmsEIC(x, y, groupidx = groupnames(x), sampleidx = sampnames(x), rtrange = x@rtrange, col = rep(1, length(sampleidx)), legtext = NULL, peakint = TRUE, sleep = 0, ...)
plot.xcmsEIC(x, y, groupidx = groupnames(x), sampleidx = sampnames(x), rtrange = x@rtrange, col = rep(1, length(sampleidx)), legtext = NULL, peakint = TRUE, sleep = 0, ...)
作者（S）----------Author(s)----------
Colin A. Smith, <a href="mailto:csmith@scripps.edu">csmith@scripps.edu</a>
参见----------See Also----------
xcmsEIC-class, png, pdf, postscript,
xcmsEIC-class，png，pdf，postscript
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
注2：由于是机器人自动翻译，难免有不准确之处，使用时仔细对照中、英文内容进行反复理解，可以帮助R语言的学习。
注3：如遇到不准确之处，请在本贴的后面进行回帖，我们会逐渐进行修订。
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发表于 2012-2-26 16:07:26
