GlmTests-class(snpStats)
GlmTests-class()所属R语言包:snpStats
Classes "GlmTests" and "GlmTestsScore"
班“GlmTests”和“GlmTestsScore”
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Classes of objects created by snp.lhs.tests and snp.rhs.tests. The class "GlmTestsScore" extends the class "GlmTests" and is invoked by setting the argument score=TRUE when calling testing functions in order to save the scores and their variances (and covariances)
类snp.lhs.tests和snp.rhs.tests创建的对象。类"GlmTestsScore"扩展类"GlmTests",并通过设置参数调用score=TRUE调用测试功能时,为了节省的成绩和他们的差异(和协)
类的对象----------Objects from the Class----------
Objects of class "GlmTests" have four slots:
对象类"GlmTests"有四个插槽:
snp.names When only single SNPs are tested, a character vector of SNP names. Otherwise a list
snp.names当只有单一的单核苷酸多态性进行测试,特征向量的SNP名称。否则列表
var.names A character vector containing names of variables
var.names包含变量名的一个特征向量
chisq A numerical vector of chi-squared test values
chisq一个卡方检验值的数值向量
df An integer vector of degrees of freedom for the tests
登发自由度的整数向量测试
N A integer vector of the number of samples contributing to
NA整数向量贡献的样本数量
The "GlmTestsScore" class extends this, adding a slot score containing a list with elements which are themselves lists with two elements:
"GlmTestsScore"类扩展了这个,增加一个插槽score包含一个元素本身有两个元素,列出列表:
U The vector (or matrix) of efficient scores
ü高效的得分向量(或矩阵)
V The upper triangle of the variance-covariance matrix of
V的协方差矩阵的上三角
方法----------Methods----------
[] signature(x = "GlmTests", i = "ANY", j =
[]的<code>签名(X =的“GlmTests”,“任何”,J =
coerce signature(from = "GlmTests", to = "data.frame"):
强制signature(from = "GlmTests", to = "data.frame"):
chi.squared signature(x = "GlmTests", df =
chi.squared的<code>签名(X =的“GlmTests”,DF =
deg.freedom signature(x = "GlmTests"): Extract
deg.freedomsignature(x = "GlmTests"):提取
names signature(x="GlmTests"): Extract (or generate)
名称signature(x="GlmTests"):提取(或产生)
p.value signature(x = "GlmTests", df =
p.value的<code>签名(X =的“GlmTests”,DF =
sample.size signature(object = "GlmTests"):
sample.sizesignature(object = "GlmTests"):
show signature(object = "GlmTests"): Show method
显示的signature(object = "GlmTests"):显示方法
summary signature(object = "GlmTests"): Summary
摘要signature(object = "GlmTests"):总结
[] signature(x = "GlmTestsScore", i = "ANY", j =
[]的<code>签名(X =“GlmTestsScore”,我=“任何”,J =
effect.sign signature(x = "GlmTestsScore", simplify = "logical"): Extract signs of associations. If simpify is
effect.signsignature(x = "GlmTestsScore", simplify = "logical"):提取关联的迹象。如果simpify
pool2 signature(x = "GlmTestsScore", y = "GlmTestsScore", score = "logical"): Combine results from two
POOL2signature(x = "GlmTestsScore", y = "GlmTestsScore", score = "logical"):合并两个
switch.alleles signature(x = "GlmTestsScore", snps = "character"): Emulate, in the score vector and its (co)variances,
switch.allelessignature(x = "GlmTestsScore", snps = "character"):仿真中的得分向量(CO)的差异,
注意----------Note----------
Most of the methods for this class are shared with the SingleSnpTests and SingleSnpTestsScore classes
这个类的方法SingleSnpTests和SingleSnpTestsScore类共享
作者(S)----------Author(s)----------
David Clayton <a href="mailto:david.clayton@cimr.cam.ac.uk">david.clayton@cimr.cam.ac.uk</a>
参见----------See Also----------
snp.lhs.tests,snp.rhs.tests, SingleSnpTests, SingleSnpTestsScore
snp.lhs.tests,snp.rhs.tests,SingleSnpTests,SingleSnpTestsScore
举例----------Examples----------
showClass("GlmTests")
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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