rmByEvi(ScISI)
rmByEvi()所属R语言包:ScISI
A function that parses through each GO protein complex and removes proteins based on evidence codes.
通过每个GO的蛋白质复合体分析和删除一个功能基于证据码的蛋白质。
译者:生物统计家园网 机器人LoveR
描述----------Description----------
The set of proteins protKept argument is a filtered set of proteins based on evidence codes given by the users. If complex contains any protein not in protKept, that protein will be deleted.
蛋白质protKept参数的设置是根据由用户提供的证据代码筛选的蛋白质组。如果复杂的包含任何不protKept的蛋白质,这种蛋白质将被删除。
用法----------Usage----------
rmByEvi(protKept, complex)
参数----------Arguments----------
参数:protKept
A character vector of filtered proteins. Only the proteins listed in this vector should be kept in the protein complexes
筛选蛋白质的一个特征向量。只有在这个向量中的蛋白质应保持在蛋白质复合体
参数:complex
A list of the GO protein complexes
的GO的蛋白质复合物列表
Details
详情----------Details----------
When getGOInfo is called, the user can specify a set of evidence codes in the argument (see getGOInfo.Rd). The function getGOInfo then generates a set of proteins, protKept (which are indexed by evidence codes other than the user specified set of evidence codes), that are valid proteins.
当getGOInfo被称为,用户可以在该参数指定一组证据代码(见getGOInfo.Rd)。函数getGOInfo然后产生一组蛋白质,protKept(这是由证据代码比其他证据代码设置指定用户索引),这是有效的蛋白质。
This function takes this set of proteins and compares it with each GO protein complex. If any protein is found within a GO protein complex and does not belong to protKept, it is deleted from that protein complex.
此功能需要这种蛋白质组和每个GO的蛋白质复合体进行比较。如果发现任何蛋白质在GO的蛋白质复合体和不属于protKept,它从该蛋白复合物被删除。
值----------Value----------
The return value is the "complex" list with a protein removed from the protein complex if that protein is not found in protKept.
返回值是“复杂”的蛋白复合物中删除,如果这种蛋白质不protKept发现一种蛋白质列表。
作者(S)----------Author(s)----------
Tony Chiang
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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