UCSCData-class(rtracklayer)
UCSCData-class()所属R语言包:rtracklayer
Class "UCSCData"
类“UCSCData”
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Each track in <acronym>UCSC</acronym> has an associated
每个轨道在<acronym>UCSC> </的缩写都有一个关联的
插槽----------Slots----------
trackLine: Object of class "TrackLine"
trackLine类"TrackLine":对象
方法----------Methods----------
Exports the track and its track line (if trackLine is TRUE) to con in the Browser Extended Display (<acronym>BED</acronym>) format. The arguments in ... are passed to export.ucsc.
出口的轨道,其轨道线(trackLine如果是TRUE)con在浏览器的扩展显示(<acronym>BED</首字母缩写)的格式。 ...参数传递export.ucsc的。
Exports the track and its track line (if trackLine is TRUE) to con in the Bed15 format. The data is taken from the columns named in expNames, which defaults to the expNames in the track line, if any, otherwise all column names. The arguments in ... are passed to export.ucsc.
出口的轨道,其轨道线(trackLine是TRUE)con在Bed15格式的。数据取自在expNames命名的列,默认为expNames在轨道线,如果有的话,否则,所有列名。 ...参数传递export.ucsc的。
Exports the track and its track line (as a comment) to con in the General Feature Format (<acronym>GFF</acronym>).
出口的轨道,其轨道线(评论)con一般特征格式(<acronym>GFF</首字母缩写)。
Exports the track and its track line to con in the
出口的轨道,其轨道线con
as(object, "UCSCData") Constructs a UCSCData from a RangedData instance, by adding a default track line and ensuring that the sequence/chromosome names are compliant with UCSC conventions. If there is a numeric score, the track line type is either "bedGraph" or "wig", depending on the feature density. Otherwise, "bed" is chosen.
as(object, "UCSCData")构造从UCSCData例如RangedData,,加入一个默认的轨道线,并确保序列/染色体的名字是与符合UCSC的公约。如果有一个数字的得分,轨道线的类型是“bedGraph”或“假发”,根据功能密度。否则,选择“床”。
作者(S)----------Author(s)----------
Michael Lawrence
参见----------See Also----------
import and export for reading and writing tracks to and from connections (files), respectively.
import和export轨道和连接(文件),分别为阅读和写作。
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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