fgsList(RTopper)
fgsList()所属R语言包:RTopper
A list of Functional Gene Set (FGS) to be used to run the examples in the RTopper package
被用来运行例子在RTopper包的功能基因组的列表(佛光山)
译者:生物统计家园网 机器人LoveR
描述----------Description----------
A list containing distinct types of FGS (i.e. Gene Ontology, KEGG pathways). Each FGS is type is a list of named chararacter vectors, one for each FGS, containing the gene identifiers. Vectors names describe the FGS. Can be used as input to runBatchGSE.
一个list包含佛光山的不同类型(即基因本体,KEGG通路)。每个FGS的类型是一个名为list向量,每个佛光chararacter的,含有基因标识。向量名描述佛光山。可以作为输入runBatchGSE。
用法----------Usage----------
data(fgsList)
格式----------Format----------
This object is a list of length two:
这个对象是一个list的长度为二:
"go": this is a list of 5 character vectors, corresponding to 5 distinct Gene Ontology (GO) terms. Genes annotated to each GO term are identified by their gene symbol;
"go":这是一个5list向量,相应的5个不同的基因本体(GO)的条款character的。每个GO术语注释的基因被确定由他们的基因符号;
"kegg": this is a list of 5 character vectors, corresponding to 5 distinct KEGG pathways. Genes annotated to each KEGG pathway are identified by their gene symbol;
"kegg":这是一个list5character向量,相应的5个不同的KEGG通路。注明每个KEGG通路的基因被确定由他们的基因符号;
源----------Source----------
The FGS were obtained from the org.Hs.eg.db pakage, (use the org.Hs.eg function to see the content); These FGS were annotated using data from GO.db and KEGG.db packages (use the GO and KEGG functions to see the content).
佛光取自org.Hs.eg.dbpakage(使用org.Hs.eg功能看到的内容);这些佛光山注明GO.db和KEGG.db包(使用数据GO和KEGG功能看到的内容)。
举例----------Examples----------
data(fgsList)
class(fgsList)
names(fgsList)
str(fgsList)
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
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