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R语言 procoil包 readCCModel()函数中文帮助文档(中英文对照)

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发表于 2012-2-26 11:30:22 | 显示全部楼层 |阅读模式
readCCModel(procoil)
readCCModel()所属R语言包:procoil

                                        Reading a coiled coil predicton model from a file
                                         从文件中读取卷曲预测中模型

                                         译者:生物统计家园网 机器人LoveR

描述----------Description----------

Function to read a coiled coil prediction model from a file into a CCModel object.
读入CCModel对象从一个文件中的预测模型螺旋线圈的功能。


用法----------Usage----------


readCCModel(file)



参数----------Arguments----------

参数:file
the name of the file from which the model should be read
从该模型应读的文件名


Details

详情----------Details----------

This function is more or less for testing purposes and future safety. Once the package procoil is loaded, the default model PrOCoilModel is pre-loaded. The function readCCModel can be used to load alternative models that may be published in the future (or created manually by intensionally changing parameters). The file must be a comma-separated table with two columns. The left column must contain strings and the right column must contain numerical values. Entries in the first column that start with "\_" refer to model parameters that are directly written into the corresponding slots of the resulting model. All other entries are interpreted as patterns (with the corresponding weights in the second columns). See CCModel for an overview of model parameters.
这个函数是多还是少,测试的目的和未来的安全。一旦包procoil加载,默认模型PrOCoilModel是预加载。的功能readCCModel可以用来加载可能在未来出版(手动或创建通过intensionally改变参数)的替代车型。该文件必须是一个具有两列的逗号分隔的表。左边的列必须包含字符串和右列必须包含数值。在第一列条目,开始“\ _”是指直接编写成模型所产生的相应插槽的参数模型。所有其他项目的解释模式(在第二列相应的权重)。看到CCModel模型参数的概述。


值----------Value----------

Upon successful completion, the function returns a CCModel object. In case of an error, the function does not return any value.
成功完成后,该函数返回一个CCModel对象。在一个错误的情况下,该函数不返回任何值。


注意----------Note----------

The PrOCoil model is available on on http://www.bioinf.jku.at/software/procoil/PrOCoilModel.patternmodel. in exactly the format the function readCCModel requires. Analogously for the alternative model optimized for balanced accuracy (see CCModel): http://www.bioinf.jku.at/software/procoil/PrOCoilModelBA.patternmodel
在PrOCoil模型上http://www.bioinf.jku.at/software/procoil/PrOCoilModel.patternmodel的可用。在完全相同的格式的功能readCCModel需要。比照替代模式,优化平衡精度(见CCModel):http://www.bioinf.jku.at/software/procoil/PrOCoilModelBA.patternmodel


作者(S)----------Author(s)----------


Ulrich Bodenhofer <a href="mailto:bodenhofer@bioinf.jku.at">bodenhofer@bioinf.jku.at</a>



参考文献----------References----------


Hochreiter, S. (2011) Complex networks govern coiled coil oligomerization - predicting and profiling by means of a machine learning approach. Mol. Cell. Proteomics.

参见----------See Also----------

procoil, CCModel-class
procoil,CCModel-class


举例----------Examples----------


## Not run: ## read example model file[#无法运行:#读取例如模型文件]
testmodel<-readCCModel("http://www.bioinf.jku.at/software/procoil/PrOCoilModel.patternmodel")

## display summary of example model[#显示例如模型总结]
testmodel

## display 10 heightes pattern weights[#显示10 heightes模式重]
weights(testmodel)[1:10]
## End(Not run)[#结束(不运行)]

转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。


注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
注2:由于是机器人自动翻译,难免有不准确之处,使用时仔细对照中、英文内容进行反复理解,可以帮助R语言的学习。
注3:如遇到不准确之处,请在本贴的后面进行回帖,我们会逐渐进行修订。
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