epheno-class(phenoTest)
epheno-class()所属R语言包:phenoTest
Class "epheno"
类“epheno”
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Object obtained with the ExpressionPhenoTest function. Contains FC, HR and pvals from testing expression values of each gene against phenotypic variables.
获得与ExpressionPhenoTest功能的对象。包含FC,人力资源和pvals从测试每个基因对表型变量的表达式值。
类的对象----------Objects from the Class----------
Objects can be created by calls of the form new("epheno", assayData, phenoData, featureData, exprs, ...).
创建对象可以通过检测的形式new("epheno", assayData, phenoData, featureData, exprs, ...)。
插槽----------Slots----------
p.adjust.method: Object of class "character" containing the multiple testing adjustment method used (if one was
p.adjust.method:Object类的"character"包含多个测试使用的调整方法(如果是
assayData: Object of class "AssayData" that is inherited from the ExpressionSet object used to create the
assayData类"AssayData"继承ExpressionSet对象用来创建对象
phenoData: Object of class "AnnotatedDataFrame" that contains information about the variables stored in the experimentData slot such as their class (continuous, categorical,
phenoData:"AnnotatedDataFrame"类对象包含experimentData如他们的阶级插槽(连续,分类存储变量的信息的,
featureData: Object of class "AnnotatedDataFrame" that is inherited from the ExpressionSet object used to create the
featureData类"AnnotatedDataFrame"继承ExpressionSet对象用来创建对象
experimentData: Object of class "MIAME" that is inherited from the ExpressionSet object used to create the
experimentData类"MIAME"继承ExpressionSet对象用来创建对象
annotation: Object of class "character" that is inherited from the ExpressionSet object used to create the
annotation类"character"继承ExpressionSet对象用来创建对象
protocolData: Object of class "AnnotatedDataFrame" that is inherited from the ExpressionSet object used to create the
protocolData类"AnnotatedDataFrame"继承ExpressionSet对象用来创建对象
.__classVersion__: Object of class "Versions" that is inherited from the ExpressionSet object used to create the
.__classVersion__类"Versions"继承ExpressionSet对象用来创建对象
延伸----------Extends----------
Class "ExpressionSet", directly. Class "eSet", by class "ExpressionSet", distance 2. Class "VersionedBiobase", by class "ExpressionSet", distance 3. Class "Versioned", by class "ExpressionSet", distance 4.
类"ExpressionSet",直接。类"eSet",类“ExpressionSet”,距离为2。类"VersionedBiobase",类“ExpressionSet”,距离3。类"Versioned",类“ExpressionSet”,距离4。
方法----------Methods----------
[ signature(x = "epheno", i = "ANY", j = "ANY"):
[signature(x = "epheno", i = "ANY", j = "ANY"):
dim signature(x = "epheno"): inherited from the
昏暗的signature(x = "epheno"):从继承
export2CSV signature(x = "epheno"): ...
export2CSVsignature(x = "epheno")...
getFc signature(x = "epheno"): getter for the fold
getFcsignature(x = "epheno"):对折的getter
getHr signature(x = "epheno"): getter for the hazard
getHrsignature(x = "epheno"):危险的getter
getMeans signature(x = "epheno"): getter for the means.
getMeanssignature(x = "epheno")“:吸气手段。
getPvals signature(x = "epheno"): getter for the
getPvalssignature(x = "epheno"):吸气
getSummaryDif signature(x = "epheno"): getter that
getSummaryDifsignature(x = "epheno")“:吸气,
gseaSignatures signature(x = "epheno", signatures = "list"): Used to compute GSEA. Please read the gseaSignatures
gseaSignaturessignature(x = "epheno", signatures = "list"):用来计算GSEA。请阅读“gseaSignatures
logFcHr signature(x = "epheno"): getter for the log of
logFcHrsignature(x = "epheno"):log的getter
p.adjust.method signature(x = "epheno"): getter for
p.adjust.methodsignature(x = "epheno"):吸气
phenoClass signature(x = "epheno"): Returns the class
phenoClasssignature(x = "epheno"):返回类
phenoNames signature(x = "epheno"): Returns the names
phenoNamessignature(x = "epheno"):返回的名称
show signature(object = "epheno"): Shows a brief
显示signature(object = "epheno"):显示一个简短的
作者(S)----------Author(s)----------
Evarist Planet
举例----------Examples----------
showClass("epheno")
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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