SetMethodsSims-class(PatientGeneSets)
SetMethodsSims-class()所属R语言包：PatientGeneSets
Class representation for depositing output from simulations.
类表示用于存放从模拟输出。
译者：生物统计家园网 机器人LoveR
描述----------Description----------
Stores results from the sim.data.p.values function.
从店sim.data.p.values函数的结果。
类的对象----------Objects from the class----------
New objects can be created using calls of the form new("SetMethodsSims", null.dist, perc.samples, spiked.set.sizes, GeneSizes, GeneSets, Coverage, EventsBySample, Mutations, Scores, results)
可以创建新的对象，使用检测的形式new("SetMethodsSims", null.dist, perc.samples, spiked.set.sizes, GeneSizes, GeneSets, Coverage, EventsBySample, Mutations, Scores, results)
插槽----------Slots----------
null.dist: Object of class "character". Can be either "Passenger null" or "Permutation null," depending on what
null.dist类"character"的对象。可无论是“空客”或“置换空，”根据什么
perc.samples: Object of class "numeric". Vector representing the probabilities of the spiked-in gene-sets being altered in any given sample, as percentages; for example perc.samples = c(75, 90) means that these probabilities are
perc.samples类"numeric"的对象。概率向量代表的钉在基因组正在改变在任何给定的样本，以百分比，例如perc.samples = c(75, 90)意味着这些概率是
spiked.set.sizes: Object of class "numeric". Vector representing the sizes, in genes, of the spiked-in gene-sets; for example, if perc.samples = c(75, 90) and spiked.set.sizes = c(50, 100), there would be 4 spiked-in sets, one with 50 genes and probability of being altered of 0.75 in each sample, one with 50 genes and probability of being altered of 0.90 in each sample, one with 100 genes and probability of being altered of 0.75 in each sample, and one with 100 genes and probability of
spiked.set.sizes类"numeric"的对象。向量代表在基因的大小，钉在基因组;例如，如果perc.samples = c(75, 90)和spiked.set.sizes = c(50, 100)，将有4钉在台套，有50个基因和存在的可能性之一0.75改变每个样本中，50个基因和0.90改变在每个样品的概率，一个有100个基因和0.75改变在每个样品的概率，并与100个基因和概率
GeneSizes: Object of class "list". The entries of the list are objects similar to GeneSizes08 and correspond to the
GeneSizes类"list"的对象。列表中的条目类似GeneSizes08的对象和对应的
GeneSets: Object of class "list". The entries of the list correspond to
GeneSets类"list"的对象。列表中的条目对应
Coverage: Object of class "list". The entries of the list are objects similar to CoverageBrain and correspond to the
Coverage类"list"的对象。列表中的条目类似CoverageBrain的对象和对应的
EventsBySample: Object of class "list". The entries of the list are objects similar to EventsBySampleBrain and correspond to the
EventsBySample类"list"的对象。列表中的条目类似EventsBySampleBrain的对象和对应的
Mutations: Object of class "list". The entries of the list are objects similar to MutationsBrain and correspond to the
Mutations类"list"的对象。列表中的条目类似MutationsBrain的对象和对应的
Scores: Object of class "list". The entries of this list are the output of cma.scores and correspond to the
Scores类"list"的对象。此列表中的条目是cma.scores输出和对应的
results: Object of class "list". The entries of this list are the output of do.gene.set.analysis and correspond to the
results类"list"的对象。此列表中的条目是do.gene.set.analysis输出和对应的
方法----------Methods----------
show signature(object = "SetMethodsSims")
显示signature(object = "SetMethodsSims")
作者（S）----------Author(s)----------
Simina M. Boca, Giovanni Parmigiani.
参考文献----------References----------
Parmigiani G. Patient-oriented gene-set analysis for cancer mutation data. Submitted, 2010.
参见----------See Also----------
CoverageBrain, EventsBySampleBrain, GeneSizes08, MutationsBrain, sim.data.p.values, do.gene.set.analysis, combine.sims, extract.sims.method
CoverageBrain，EventsBySampleBrain，GeneSizes08，MutationsBrain，sim.data.p.values，do.gene.set.analysis，combine.sims，extract.sims.method
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
注2：由于是机器人自动翻译，难免有不准确之处，使用时仔细对照中、英文内容进行反复理解，可以帮助R语言的学习。
注3：如遇到不准确之处，请在本贴的后面进行回帖，我们会逐渐进行修订。
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发表于 2012-2-26 10:24:40
