Visualization of methylation patterns in terms of "Lollipops" plot
甲基化模式的可视化的“棒棒糖”的图
用法----------Usage----------
MethLollipops(methData)
参数----------Arguments----------
参数:methData
List; contains information on the pairwise alignments, and methylated CpG motifs.
名单包含成对的路线,和甲基化的CpG基序的信息。
Details
详情----------Details----------
The lollipops plot allows the user to study the genomic localization and states of CpG sites. Each circle marks a CpG site under study. Full circles display methylated CpGs and the non filled ones stand for non methylated CpG states. The examined sequences are aligned with respect to the genomic sequence in order to allow for an intuitive visualization of methylation states according to their genomic position.
棒棒糖图允许用户研究基因的定位和CpG位点的状态。每个圆圈,标志着下CpG位点的研究。完整的圆,显示甲基化的CPGs和非填充的非甲基化的CpG州站。检查序列的基因组序列对齐,以便直观的可视化甲基化状态,根据其基因组的位置。