qPCRpros(HTqPCR)
qPCRpros()所属R语言包:HTqPCR
Example processed qPCR data
例如处理qPCR数据
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Processed version of the raw data in qPCRraw, to be used as example data in the HTqPCR package. The data has been processed with setCategory to mark the feature categories, and with normalizaHTqPCRCard using rank invariant normalisation.
版本在qPCRraw原始数据处理,例如数据在HTqPCR包被用来作为。已处理的数据setCategory标记的功能类别,并与normalizaHTqPCRCard使用排名不变标准化。
用法----------Usage----------
data(qPCRpros)
格式----------Format----------
The format is: Formal class 'qPCRset' [package ".GlobalEnv"] with 9 slots ..@ featureNames : chr [1:384] "Gene1" "Gene2" "Gene3" "Gene4" ... ..@ sampleNames : chr [1:6] "sample1" "sample2" "sample3" "sample4" ... ..@ exprs : num [1:384, 1:6] 11.5 33.9 28 26.9 25 ... .. ..- attr(*, "dimnames")=List of 2 .. .. ..$ : chr [1:384] "Gene1" "Gene2" "Gene3" "Gene4" ... .. .. ..$ : chr [1:6] "sample1" "sample2" "sample3" "sample4" ... ..@ flag :'data.frame': 384 obs. of 6 variables: .. ..$ V1: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... .. ..$ V2: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... .. ..$ V3: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... .. ..$ V4: chr [1:384] "Flagged" "Flagged" "Passed" "Passed" ... .. ..$ V5: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... .. ..$ V6: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... ..@ featureType : Factor w/ 2 levels "Endogenous Control",..: 1 2 2 2 2 2 2 2 2 2 ... ..@ featurePos : chr [1:384] "A1" "A2" "A3" "A4" ... ..@ featureClass : Factor w/ 3 levels "Kinase","Marker",..: 3 3 2 1 2 3 1 3 3 3 ... ..@ featureCategory:'data.frame': 384 obs. of 6 variables: .. ..$ X1: chr [1:384] "Unreliable" "OK" "OK" "OK" ... .. ..$ X2: chr [1:384] "Unreliable" "Undetermined" "OK" "OK" ... .. ..$ X3: chr [1:384] "Unreliable" "OK" "OK" "OK" ... .. ..$ X4: chr [1:384] "OK" "OK" "OK" "OK" ... .. ..$ X5: chr [1:384] "Unreliable" "Undetermined" "OK" "OK" ... .. ..$ X6: chr [1:384] "OK" "OK" "OK" "OK" ... ..@ history :'data.frame': 1 obs. of 1 variable: .. ..$ history: chr "Default HTqPCR qPCRset object with processed data."
格式是:正式类的qPCRset“包”GlobalEnv。“] 9槽.. @ featureNames:CHR [1:384]”Gene1“Gene2”,“Gene3”Gene4“... .. @ sampleNames:CHR [1:6]“SAMPLE1”的sample2“sample3”sample4“... .. @ exprs:NUM [1:384,1:6] 11.5 33.9 28 26.9 25 ... .. .. - ATTR(*,“dimnames”)= 2的名单...... .. CHR .. $:[1:384]“Gene1”Gene2“,”Gene3“Gene4”... .. .. CHR .. $:[1:6]“SAMPLE1”的sample2“sample3”sample4“... .. @标志:“数据框”:384 OBS。 6个变量:...... .. $ V1:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. .. $ V2:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. .. $ V3的:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. .. $ V4的:CHR [1:384]“标记”,“标记”,“通过”,“合格”... .. .. $ V5:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. .. $ V6:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. @ featureType因素W / 2级“内对照”,..:1 2 2 2 2 2 2 2 2 2 ... .. @ featurePos:CHR [1:384]“格A1”的“A2”的“A3”“A4纸”... .. @ featureClass因素W / 3水平“激酶”,“标记”,..:3 3 2 1 2 3 1 3 3 3 ... .. @ featureCategory:“数据框:384 OBS。 6个变量:...... .. $ X1:CHR [1:384]“不可靠”,“确定”“确定”“确定”... .. .. $ X2:CHR [1:384]“不可靠”,“未决定用途”,“确定”“确定”... .. .. $ X3:CHR [1:384]“不可靠”,“确定”“确定”“确定”... .. .. $ X4:CHR [1:384]“确定”“确定”“确定”“确定”... .. .. $ X5:CHR [1:384]“不可靠”,“未决定”确定“”确定“...... .. .. $ 5233:CHR [1:384]“确定”“确定”“确定”“确定”... .. @历史:“数据框”:1 OBS。 1变量:.. .. $历史:CHR“默认HTqPCR与处理的数据qPCRset对象。”
举例----------Examples----------
data(qPCRpros)
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注:
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