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R语言 Biobase包 AssayData-class()函数中文帮助文档(中英文对照)

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发表于 2012-2-25 13:17:56 | 显示全部楼层 |阅读模式
AssayData-class(Biobase)
AssayData-class()所属R语言包:Biobase

                                        Class "AssayData"
                                         类“AssayData”

                                         译者:生物统计家园网 机器人LoveR

描述----------Description----------

Container class defined as a class union of list and environment.  Designed to contain one or more matrices of the same dimension.
类list和environment的工会作为容器类定义。设计为包含一个或多个相同维度的矩阵。


方法----------Methods----------




combine signature(x = "AssayData", y = "AssayData"): This method uses cbind to create new AssayData elements that contain the samples of both arguments x and y.
结合signature(x = "AssayData", y = "AssayData"):此方法使用cbind创建包含两个参数x和y样品的的新AssayData元素。

Both AssayData arguments to combine must have the same collection of elements.  The elements must have identical numbers of rows (features). The numerical contents of any columns (samples) present in the same element of different AssayData must be identical.  The storageMode of the AssayData arguments must be identical, and the function returns an AssayData with storageMode
结合都AssayData参数必须有相同的元素的集合。该元素必须有相同的行数(特征)。任何列(样品)目前在相同不同AssayData的元素数值的内容必须是相同的。的AssayData参数storageMode必须是相同的,函数返回与storageMode AssayData




featureNames signature(object = "AssayData")
featureNamessignature(object = "AssayData")




featureNames<- signature(object = "AssayData", value = "ANY"): Return or set the feature names as a character vector.  These are the row names of the AssayData elements. value can be a character or numeric vector; all
featureNames < - signature(object = "AssayData", value = "ANY"):返回或设置功能名称作为一个特征向量。这些的AssayData元素的行名。 value可以是字符或数字向量;




sampleNames signature(object = "AssayData")
sampleNamessignature(object = "AssayData")




sampleNames<- signature(object = "AssayData", value="ANY"): Return or set the sample names.  These are the column names of the the AssayData elements and the row names of phenoData. value can be a character or numeric
sampleNames < - signature(object = "AssayData", value="ANY"):返回或设置样本名。这些的AssayData元素的列名和行名称phenoData。 value可以是字符或数字




storageMode signature(object = "AssayData")
storageModesignature(object = "AssayData")




storageMode<- signature(object = "AssayData",         value="character"): Return or set the storage mode for the instance. value can be one of three choices: "lockedEnvironment", "environment", and "list". Environments offer a mechanism for storing data that avoids some of the copying that occurs when using lists.  Locked environment help to ensure data integrity.  Note that environments are one of the few R objects that are pass-by-reference.  This means that if you modify a copy of an environment, you also modify the original. For this reason, we recommend using lockedEnvironment whenever possible.
storageMode < - signature(object = "AssayData",         value="character"):返回或设置存储模式的实例。 value可以有三种选择:"lockedEnvironment","environment","list"。环境提供了一个用于存储数据的机制,以避免使用列表时发生的一些复制。锁定的环境,帮助,以确保数据的完整性。请注意,环境是一个为数不多的R对象是按引用传递。这意味着,如果你修改环境的副本,你还可以修改原来的。出于这个原因,我们建议尽可能使用lockedEnvironment。

Additional functions operating on AssayData include:
AssayData经营的附加功能包括:




assayData[[name]] Select element name from assayData.
assayData [名称]选择元素nameassayData。

"environment", "list"), ...)</dt> Use storage.mode to create a
“环境”,“列表”),...)</ DT>使用storage.mode创建




assayDataValidMembers(assayData, required) Validate assayData, ensuring that the named elements required are present, matrices are of the same dimension, and featureNames (rownames) are
assayDataValidMembers(assayData,必需)验证assayData,确保命名的元素required存在,矩阵相同的维和featureNames(rownames)




assayDataElement(object, element) See eSet-class
assayDataElement(对象,元素)eSet-class




assayDataElementReplace(object, element, value) See eSet-class
assayDataElementReplace(对象,要素,价值),请参阅eSet-class




assayDataElementNames(object) See eSet-class
assayDataElementNames(对象)eSet-class


作者(S)----------Author(s)----------


Biocore



参见----------See Also----------

eSet-class ExpressionSet-class
eSet-classExpressionSet-class

转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。


注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
注2:由于是机器人自动翻译,难免有不准确之处,使用时仔细对照中、英文内容进行反复理解,可以帮助R语言的学习。
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