affycomp.compfigs.auxiliary(affycomp)
affycomp.compfigs.auxiliary()所属R语言包：affycomp
Auxiliary functions to create comparitive Figures
辅助功能创建的比较图
译者：生物统计家园网 机器人LoveR
描述----------Description----------
These functions are auxiliary function to affycompPlot. These Figures are used to compare expression measures. They take lists with components created by the assessDilution and assessSpikeIn
这些功能是辅助功能affycompPlot。这些数字是用来比较表达式措施。他们采取与assessDilution和assessSpikeIn创建的组件列表
用法----------Usage----------
affycomp.compfig2(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 2")
affycomp.compfig3(l, method.names = as.character(1:length(l)),
main = "Figure 3")
affycomp.compfig4a(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 4a")
affycomp.compfig4b(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 4b")
affycomp.compfig4c(l, method.names = as.character(1:length(l)),
add.legend = TRUE, rotate=TRUE, main = "Figure 4c")
affycomp.compfig5a(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 5a", maxfp=100)
affycomp.compfig5b(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 5b", maxfp=100)
affycomp.compfig5cde(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 5c", maxfp=100,
type=c("low","med","high"))
affycomp.compfig5c(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 5c", maxfp=100)
affycomp.compfig5d(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 5d", maxfp=100)
affycomp.compfig5e(l, method.names = as.character(1:length(l)),
add.legend = TRUE, main = "Figure 5e", maxfp=100)
参数----------Arguments----------
参数：l
a list of lists with the necessary components to create the Figure. See details.
一个必要的组件创建图列出列表。查看详情。
参数：method.names
a character vector with the names of the expression measures methodologies being compared.
特征向量与表达的名称措施，被比较的方法。
参数：add.legend
logical. If TRUE a legend is added.
逻辑。如果是TRUE传说添加。
参数：main
title of the Figure.
图的标题。
参数：rotate
in the case of compfig4c one can eiher show the actual local slopes or the bias (local slope minus 1).
中的compfig4c一的情况下，可以eiher显示当地实际斜坡或偏见（当地边坡减1）。
参数：maxfp
range of the false positives in ROC will be from 0 to maxfp
中华民国误报的范围将是从0到maxfp
参数：type
compfig5cdef is the engine for 5c, 5d, and 5e. type tells is which of these 4 to run.
compfig5cdef是5C，5D，5E发动机。 type讲述的是这4运行。
Details
详情----------Details----------
These are similar to the functions defined in affycomp.figures.auxiliary. Main difference is that here you send lists with the result of the assessment functions as components.
这些affycomp.figures.auxiliary定义的功能是类似的。主要区别是，在这里你发送名单，作为组件的评估职能的结果。
值----------Value----------
Figures are produced.
数字产生。
作者（S）----------Author(s)----------
Rafael A. Irizarry
举例----------Examples----------
library(affycompData)
data(rma.assessment)
data(mas5.assessment)
affycomp.compfig2(list(rma.assessment$Dilution,mas5.assessment$Dilution))
affycomp.compfig3(list(rma.assessment$Dilution,mas5.assessment$Dilution))
affycomp.compfig4a(list(rma.assessment$Signal,mas5.assessment$Signal))
affycomp.compfig4b(list(rma.assessment$Dilution,mas5.assessment$Dilution))
affycomp.compfig5a(list(rma.assessment$FC,mas5.assessment$FC))
affycomp.compfig5b(list(rma.assessment$FC2,mas5.assessment$FC2))
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
注2：由于是机器人自动翻译，难免有不准确之处，使用时仔细对照中、英文内容进行反复理解，可以帮助R语言的学习。
注3：如遇到不准确之处，请在本贴的后面进行回帖，我们会逐渐进行修订。
|
发表于 2012-2-25 11:10:17
