R语言 XDE包 XdeParameter-class()函数中文帮助文档(中英文对照)

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XdeParameter-class(XDE)
XdeParameter-class()所属R语言包：XDE

                                        Container class for storing options of the Bayesian hierarchical model
                                         容器类贝叶斯层次模型的存储选项

                                         译者：生物统计家园网 机器人LoveR

描述----------Description----------

This class contains initial values for the first iteration of the MCMC, options for saving MCMC chains, options for changing the tuning parameters of the Metropolis-Hastings algorithm, options for
这个类包含的MCMC方法的第一次迭代的初始值，保存的MCMC链，改变的Metropolis-Hastings算法，期权调整参数选项的选项


类的对象----------Objects from the Class----------

Objects can be created by calls of the form new("XdeParameter",   esetList, updates, tuning, hyperparameters, output, iterations,   burnin, seed, randomSeed, genes, studies, firstMcmc,   specifiedInitialValues, directory, phenotypeLabel, seed, showIterations,   verbose, studyNames, one.delta).
创建对象可以通过检测的形式new("XdeParameter",   esetList, updates, tuning, hyperparameters, output, iterations,   burnin, seed, randomSeed, genes, studies, firstMcmc,   specifiedInitialValues, directory, phenotypeLabel, seed, showIterations,   verbose, studyNames, one.delta)。


插槽----------Slots----------




updates: Object of class numeric. The frequency
updates类numeric的对象。频率




tuning: Object of class numeric.  Tuning
tuning类numeric的对象。调音




hyperparameters: Object of class
hyperparameters：对象类




output: Object of class numeric. Indicator for whether to save the MCMC chain to file.  If the value is zero, the
output类numeric的对象。是否保存的MCMC链提出的指标。如果值是零，




iterations: Object of class numeric.  The total
iterations类numeric的对象。总




burnin: Object of class logical.  If set to FALSE, by default none of the chains will be saved (called for its
burnin类logical的对象。如果设置为FALSE，默认情况下，没有链将被保存（其称为




notes: Object of class character.
notes类character的对象。




firstMcmc: Object of class environment. Values
firstMcmc类environment的对象。值




seed: Object of class integer.  Seed used for
seed类integer的对象。种子用4




showIterations: Object of class logical.
showIterations类logical的对象。




specifiedInitialValues: Object of class logical.  If TRUE (the default), the values stored in
specifiedInitialValues类logical的对象。如果是TRUE（默认）值存储在




directory: Object of class character. Specifies
directory类character的对象。指定




phenotypeLabel: Object of class character. The
phenotypeLabel类character的对象。 “




verbose: Object of class logical
verbose类logical：对象




studyNames: Object of class character. Names of
studyNames类character的对象。姓名




one.delta: Logical.  If TRUE, a gene is assumed to be
one.delta：逻辑。如果是TRUE，一个基因被认为是


方法----------Methods----------




burnin signature(object = "XdeParameter") logical.
燃尽signature(object = "XdeParameter")逻辑。




burnin<- signature(object = "XdeParameter", value =
燃尽< - 的<code>签名（对象=“XdeParameter”，值=




directory signature(object = "XdeParameter") character string giving the path or relative path to store log files from the
目录signature(object = "XdeParameter")字符串，存储log文件的路径或相对路径




directory<- signature(object = "XdeParameter")Path to
目录< - signature(object = "XdeParameter")路径




firstMcmc signature(object = "XdeParameter") See firstMcmc
firstMcmcsignature(object = "XdeParameter")firstMcmc




firstMcmc<- signature(object = "XdeParameter", value = "environment")
firstMcmc < - signature(object = "XdeParameter", value = "environment")




firstMcmc<- signature(object = "XdeParameter", value = "list")
firstMcmc < - signature(object = "XdeParameter", value = "list")




hyperparameters signature(object = "XdeParameter") See
hyperparameterssignature(object = "XdeParameter")见




hyperparameters<- signature(object = "XdeParameter") See
hyperparameters < - signature(object = "XdeParameter")见




initialize signature(.Object = "XdeParameter") Method for initializing an instance of the class.  The default values
初始化signature(.Object = "XdeParameter")初始化一个类的实例的方法。默认值




iterations signature(object = "XdeParameter") Accessor
迭代signature(object = "XdeParameter")存取




iterations<- signature(object = "XdeParameter", value =         numeric) The replacement method is useful for setting a
迭代< - signature(object = "XdeParameter", value =         numeric)替代方法是非常有用的设置




iterations<- signature(object = "XdeParameter", value = "integer")
迭代< - signature(object = "XdeParameter", value = "integer")




output signature(object = "XdeParameter") See also
输出signature(object = "XdeParameter")又见




output<- signature(object = "XdeParameter") See also output
输出< - signature(object = "XdeParameter")又见output




phenotypeLabel signature(object = "XdeParameter")
phenotypeLabelsignature(object = "XdeParameter")




phenotypeLabel<- signature(object = "XdeParameter", value = "character")
phenotypeLabel < - signature(object = "XdeParameter", value = "character")




savedIterations signature(object = "XdeParameter") The number of MCMC iterations written to file.  It is the value of the total number of iterations divided by the thinning parameter.  See
savedIterationssignature(object = "XdeParameter")书面提交的MCMC迭代的数量。这是值的分为变薄参数的迭代总数。见




seed signature(object = "XdeParameter") See
种子signature(object = "XdeParameter")见




seed<- signature(object = "XdeParameter",
种子< - 的<code>签名（对象=的“XdeParameter”




show signature(object = "XdeParameter") Produces a short summary of objects that are instances of the
显示signature(object = "XdeParameter")产生的实例的一个对象的简短摘要




showIterations signature(object = "XdeParameter") logical
showIterationssignature(object = "XdeParameter")逻辑




showIterations<- signature(object = "XdeParameter")
showIterations < - signature(object = "XdeParameter")




studyNames signature(object = "XdeParameter") Names of
studyNamessignature(object = "XdeParameter")名称




studyNames<- signature(object = "XdeParameter")
studyNames < - signature(object = "XdeParameter")




thin signature(x = "XdeParameter") See
薄signature(x = "XdeParameter")见




thin<- signature(x = "XdeParameter", value = numeric)
薄< - signature(x = "XdeParameter", value = numeric)




tuning signature(object = "XdeParameter") See also tuning
调整signature(object = "XdeParameter")又见tuning




tuning<- signature(object = "XdeParameter")
调整< - signature(object = "XdeParameter")




updates signature(object = "XdeParameter") See also updates
更新signature(object = "XdeParameter")又见updates




updates<- signature(object = "XdeParameter")
更新< - signature(object = "XdeParameter")


作者（S）----------Author(s)----------


R. Scharpf



参考文献----------References----------

<h3>See Also</h3>   <code>ExpressionSetList-class</code>

举例----------Examples----------


showClass("XdeParameter")
##See the XdeParameterClass vignette[＃请参阅XdeParameterClass小插曲]

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