group.density(xcms)
group.density()所属R语言包:xcms
Group peaks from different samples together
从不同样品组峰
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Group peaks together across samples using overlapping m/z bins and calculation of smoothed peak distributions in chromatographic time.
集团高峰跨样品的色谱重叠的m / z箱和平滑的峰值分布计算。
参数----------Arguments----------
参数:object
the xcmsSet object
xcmsSet对象
参数:minfrac
minimum fraction of samples necessary in at least one of the sample groups for it to be a valid group
样品必要的最低分数至少在它的样本群体之一,是一个有效的组
参数:minsamp
minimum number of samples necessary in at least one of the sample groups for it to be a valid group
最低所需样品数量至少在它的样本群体之一,是一个有效的组
参数:bw
bandwidth (standard deviation or half width at half maximum) of gaussian smoothing kernel to apply to the peak density chromatogram
带宽高斯平滑核心(标准偏差或半高半宽)适用于峰值电流密度色谱
参数:mzwid
width of overlapping m/z slices to use for creating peak density chromatograms and grouping peaks across samples
重叠的m / z片用于创建峰值密度色谱和分组各样品的峰宽
参数:max
maximum number of groups to identify in a single m/z slice
最大的群体数量,以确定在一个单一的m / z片
参数:sleep
seconds to pause between plotting successive steps of the peak grouping algorithm. peaks are plotted as points showing relative intensity. identified groups are flanked by dotted vertical lines.
秒暂停之间绘制的高峰期分组算法的连续步骤。峰绘制点,呈现出相对强度。鉴定组虚线垂直线两侧。
值----------Value----------
An xcmsSet object with peak group assignments and statistics.
xcmsSet峰集团分配和统计对象。
方法----------Methods----------
group(object, bw = 30, minfrac = 0.5, minsamp = 1, mzwid = 0.25, max = 50, sleep = 0)
group(object, bw = 30, minfrac = 0.5, minsamp = 1, mzwid = 0.25, max = 50, sleep = 0)
参见----------See Also----------
xcmsSet-class, density
xcmsSet-class,density
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
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