scoreList-class(tigre)
scoreList-class()所属R语言包:tigre
Class "scoreList"
类“scoreList”
译者:生物统计家园网 机器人LoveR
描述----------Description----------
'scoreList' is an object which contain the genes, parameters, log-likelihoods and arguments of models. With the data in a scoreList item and the original data used for creating the models, the models
“scoreList”是一个对象,它包含的基因,参数,对数似然性和模型的参数。随着在scoreList项目的数据和原始数据用于建立模型,模型
类的对象----------Objects from the Class----------
Objects can be created by calls of the form scoreList(params, loglikelihoods, genes, modelArgs, knownTargets, TF, sharedModel).
创建对象可以通过检测的形式scoreList(params, loglikelihoods, genes, modelArgs, knownTargets, TF, sharedModel)。
插槽----------Slots----------
params: The parameters of the models.
params:模型参数。
loglikelihoods: The log-likelihoods of the models.
loglikelihoods:对数似然性模型。
baseloglikelihoods: The log-likelihoods of
baseloglikelihoods:对数似然性
genes: The genes used in the models.
genes:在模型中使用的基因。
modelArgs: A list of arguments used to generate the models.
modelArgs:一个用于生成模型的参数列表。
knownTargets: The list of known targets used in the ranking.
knownTargets:排名用已知的目标列表。
TF: The TF used in the ranking.
TF:在排名中使用的TF。
sharedModel: Shared model for known targets.
sharedModel:共享模型已知的目标。
datasetName: Dataset name, used when exporting scores to a database.
datasetName:DataSet名称,出口成绩数据库时使用。
experimentSet: Experiment set name, used when exporting scores to a database.
experimentSet:实验组的名称,出口成绩数据库时使用。
方法----------Methods----------
Class-specific methods:
类的具体方法:
write.scores(object, ...) Writes the log-likelihoods
write.scores(object, ...)写入log似然性
genes(object), genes(object)<- value Access and set genes
genes(object),genes(object)<- value访问和一套genes
knownTargets(object), knownTargets(object)<- value Access and set knownTargets
knownTargets(object),knownTargets(object)<- value访问和一套knownTargets
loglikelihoods(object), loglikelihoods(object)<- value Access and set loglikelihoods
loglikelihoods(object),loglikelihoods(object)<- value访问和一套loglikelihoods
baseloglikelihoods(object), baseloglikelihoods(object)<- value Access and set baseloglikelihoods
baseloglikelihoods(object),baseloglikelihoods(object)<- value访问和一套baseloglikelihoods
modelArgs(object), modelArgs(object)<- value Access and set modelArgs
modelArgs(object),modelArgs(object)<- value访问和一套modelArgs
params(object), params(object)<- value Access and set params
params(object),params(object)<- value访问和一套params
sharedModel(object), sharedModel(object)<- value Access and set sharedModel
sharedModel(object),sharedModel(object)<- value访问和一套sharedModel
TF(object), TF(object)<- value Access and set TF
TF(object),TF(object)<- value访问和一套TF
datasetName(object), datasetName(object)<- value Access and set datasetName
datasetName(object),datasetName(object)<- value访问和一套datasetName
experimentSet(object), experimentSet(object)<- value Access and set experimentSet
experimentSet(object),experimentSet(object)<- value访问和一套experimentSet
Standard generic methods:
标准的通用方法:
object[(index) Conducts subsetting of the scoreList.
object[(index)的scoreList进行子集。
c(object, ...) Concatenates scoreLists.
c(object, ...)串连scoreLists。
length(object) Returns the length of the list.
length(object)返回列表的长度。
show(object) Informatively display object contents.
show(object)请提供知识显示对象内容。
sort(object, decreasing=FALSE) Sort the list according
sort(object, decreasing=FALSE)根据排序列表
作者(S)----------Author(s)----------
Antti Honkela, Jonatan Ropponen
参见----------See Also----------
GPRankTargets, GPRankTFs, generateModels, write.table.
GPRankTargets,GPRankTFs,generateModels,write.table。
举例----------Examples----------
showClass("scoreList")
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
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