numCellQualControl(RNAither)
numCellQualControl()所属R语言包:RNAither
Quality control of the number of cells
单元数量的质量控制
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Plots a histogram of the cell number per well and allows the user to set an upper and a lower threshold so as to exclude wells from the analysis.
绘制直方图每孔单元数,并允许用户设置一个上限和下限阈值,以便从分析中排除井。
用法----------Usage----------
numCellQualControl(DataSetFile, nbLinesHeader, plotTitle)
参数----------Arguments----------
参数:DataSetFile
a dataset file generated with generateDatasetFile
数据集文件生成的以generateDatasetFile
参数:nbLinesHeader
typically 3
通常为3
参数:plotTitle
the plot title
图标题
值----------Value----------
Prints out the list of wells under and over the predefined thresholds in the shell.
打印出井名单,并且在外壳的预定义阈值。
Saves a list of discarded siRNA values (if applicable) in a text file named after the experiment name specified in the header concatenated with either "numCellQualControl\_discarded\_higher.txt" or "numCellQualControl\_discarded\_lower.txt".
保存在一个废弃的siRNA值列表后要么串联头中指定的实验名称命名的文本文件(如果适用)“numCellQualControl \ _discarded \ _higher.txt”或“numCellQualControl \ _discarded \ _lower.txt”。
Saves the histogram with the applied thresholds in a pdf file named after the experiment name specified in the header concatenated with the plotTitle.
保存后的头在 plotTitle串联指定的实验名称命名的PDF文件中的应用阈值的直方图。
Overwrites the given DataSetFile with the new dataset.
覆盖给定的 DataSetFile新的数据集。
参见----------See Also----------
percCellQualControl
percCellQualControl
举例----------Examples----------
data(exampleHeader, package="RNAither")
data(exampleDataset, package="RNAither")
saveDataset(header, dataset, "save_testfile1.txt")
numCellQualControl("save_testfile1.txt", 3, "Histogram of the number of cells")
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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