GCAdjustParams(Repitools)
GCAdjustParams()所属R语言包:Repitools
Container for parameters for mappability and GC content adjusted absolute
为为mappability和GC含量参数的集装箱调整绝对
译者:生物统计家园网 机器人LoveR
描述----------Description----------
The parameters are used by the absoluteCN function.
absoluteCN函数的参数。
构造----------Constructor----------
GCAdjustParams(genome, mappability, min.mappability, n.bins = NULL, min.bin.size = 1, poly.degree = NULL, ploidy = 1) Creates a GCAdjustParams object.
GCAdjustParams(genome, mappability, min.mappability, n.bins = NULL, min.bin.size = 1, poly.degree = NULL, ploidy = 1)建立GCAdjustParams的对象。
genome A BSgenome object of the
genomeABSgenome对象
mappability A BSgenome object, containing
mappabilityABSgenome对象,包含
min.mappability A number between 0 and 100 that is a cutoff
min.mappability0和100之间的数字是一个截止
n.bins The number of GC content bins to divide the windows
n.binsGC含量箱分割窗口
min.bin.size GC bins with less than this many count windows inside
min.bin.size比很多计数窗内的GC箱
poly.degree The degree of the polynomial to fit to the GC bins'
poly.degree多项式的程度,以适应到GC箱“
ploidy A vector of multipliers to use on the estimated absolute copy number of each sample,
ploidy向量使用的估计每个样品的绝对拷贝数的乘数,
作者(S)----------Author(s)----------
Dario Strbenac
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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