找回密码
 注册
查看: 502|回复: 0

R语言 phenoTest包 epheno-class()函数中文帮助文档(中英文对照)

[复制链接]
发表于 2012-2-26 11:03:10 | 显示全部楼层 |阅读模式
epheno-class(phenoTest)
epheno-class()所属R语言包:phenoTest

                                        Class "epheno"
                                         类“epheno”

                                         译者:生物统计家园网 机器人LoveR

描述----------Description----------

Object obtained with the ExpressionPhenoTest function. Contains FC, HR and pvals from testing expression values of each gene against phenotypic variables.
获得与ExpressionPhenoTest功能的对象。包含FC,人力资源和pvals从测试每个基因对表型变量的表达式值。


类的对象----------Objects from the Class----------

Objects can be created by calls of the form new("epheno",   assayData, phenoData, featureData, exprs, ...).
创建对象可以通过检测的形式new("epheno",   assayData, phenoData, featureData, exprs, ...)。


插槽----------Slots----------




p.adjust.method: Object of class "character" containing the multiple testing adjustment method used (if one was
p.adjust.method:Object类的"character"包含多个测试使用的调整方法(如果是




assayData: Object of class "AssayData" that is inherited from the ExpressionSet object used to create the
assayData类"AssayData"继承ExpressionSet对象用来创建对象




phenoData: Object of class "AnnotatedDataFrame" that contains information about the variables stored in the experimentData slot such as their class (continuous, categorical,
phenoData:"AnnotatedDataFrame"类对象包含experimentData如他们的阶级插槽(连续,分类存储变量的信息的,




featureData: Object of class "AnnotatedDataFrame" that is inherited from the ExpressionSet object used to create the
featureData类"AnnotatedDataFrame"继承ExpressionSet对象用来创建对象




experimentData: Object of class "MIAME" that is inherited from the ExpressionSet object used to create the
experimentData类"MIAME"继承ExpressionSet对象用来创建对象




annotation: Object of class "character" that is inherited from the ExpressionSet object used to create the
annotation类"character"继承ExpressionSet对象用来创建对象




protocolData: Object of class "AnnotatedDataFrame" that is inherited from the ExpressionSet object used to create the
protocolData类"AnnotatedDataFrame"继承ExpressionSet对象用来创建对象




.__classVersion__: Object of class "Versions" that is inherited from the ExpressionSet object used to create the
.__classVersion__类"Versions"继承ExpressionSet对象用来创建对象


延伸----------Extends----------

Class "ExpressionSet", directly. Class "eSet", by class "ExpressionSet", distance 2. Class "VersionedBiobase", by class "ExpressionSet", distance 3. Class "Versioned", by class "ExpressionSet", distance 4.
类"ExpressionSet",直接。类"eSet",类“ExpressionSet”,距离为2。类"VersionedBiobase",类“ExpressionSet”,距离3。类"Versioned",类“ExpressionSet”,距离4。


方法----------Methods----------




[ signature(x = "epheno", i = "ANY", j = "ANY"):
[signature(x = "epheno", i = "ANY", j = "ANY"):




dim signature(x = "epheno"): inherited from the
昏暗的signature(x = "epheno"):从继承




export2CSV signature(x = "epheno"): ...
export2CSVsignature(x = "epheno")...




getFc signature(x = "epheno"): getter for the fold
getFcsignature(x = "epheno"):对折的getter




getHr signature(x = "epheno"): getter for the hazard
getHrsignature(x = "epheno"):危险的getter




getMeans signature(x = "epheno"): getter for the means.
getMeanssignature(x = "epheno")“:吸气手段。




getPvals signature(x = "epheno"): getter for the
getPvalssignature(x = "epheno"):吸气




getSummaryDif signature(x = "epheno"): getter that
getSummaryDifsignature(x = "epheno")“:吸气,




gseaSignatures signature(x = "epheno", signatures =         "list"): Used to compute GSEA. Please read the gseaSignatures
gseaSignaturessignature(x = "epheno", signatures =         "list"):用来计算GSEA。请阅读“gseaSignatures




logFcHr signature(x = "epheno"): getter for the log of
logFcHrsignature(x = "epheno"):log的getter




p.adjust.method signature(x = "epheno"): getter for
p.adjust.methodsignature(x = "epheno"):吸气




phenoClass signature(x = "epheno"): Returns the class
phenoClasssignature(x = "epheno"):返回类




phenoNames signature(x = "epheno"): Returns the names
phenoNamessignature(x = "epheno"):返回的名称




show signature(object = "epheno"): Shows a brief
显示signature(object = "epheno"):显示一个简短的


作者(S)----------Author(s)----------



Evarist Planet




举例----------Examples----------


showClass("epheno")

转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。


注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
注2:由于是机器人自动翻译,难免有不准确之处,使用时仔细对照中、英文内容进行反复理解,可以帮助R语言的学习。
注3:如遇到不准确之处,请在本贴的后面进行回帖,我们会逐渐进行修订。
回复

使用道具 举报

您需要登录后才可以回帖 登录 | 注册

本版积分规则

手机版|小黑屋|生物统计家园 网站价格

GMT+8, 2025-2-1 13:08 , Processed in 0.025709 second(s), 16 queries .

Powered by Discuz! X3.5

© 2001-2024 Discuz! Team.

快速回复 返回顶部 返回列表