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R语言 MmPalateMiRNA包 PalateData()函数中文帮助文档(中英文对照)

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发表于 2012-2-26 01:07:16 | 显示全部楼层 |阅读模式
PalateData(MmPalateMiRNA)
PalateData()所属R语言包:MmPalateMiRNA

                                         Murine Secondary Palate Development miRNA Expression Data
                                         小鼠继发腭发展的miRNA表达数据

                                         译者:生物统计家园网 机器人LoveR

描述----------Description----------

This data set contains two-color miRNA microarray expression data obtained from mouse embryonic tissue during gestational days (GD) 12, 13, and 14,  which represents the critical period of palate development in the mouse.
该数据集包含两色的miRNA微阵列表达在妊娠天(广东)12日,13日和14日,代表在小鼠腭发展的关键时期,从小鼠胚胎组织获得的数据。


用法----------Usage----------


data(PalateData)



格式----------Format----------

The data are in the format of an "RGList",  which in this case is a list with the following 9 elements:
数据在"RGList",在这种情况下,有以下9个元素的列表格式:




R matrix of dimension 6336 x 9 which contains the red
R维矩阵6336×9,其中包含红色




G matrix of dimension 6336 x 9 which contains the green
G维矩阵6336×9,其中包含绿色




Rb matrix of dimension 6336 x 9 which contains the red
Rb维矩阵6336×9,其中包含红色




Gb matrix of dimension 6336 x 9 which contains the green
Gb维矩阵6336×9,其中包含绿色




source source of the images, here "imagene"
source源的图像,这里的“imagene”




Field.Dimensions numeric vector giving the field
Field.Dimensions数字矢量领域




weights matrix of dimension 6336 x 9 which contains
weights维矩阵6336×9,其中包含




printer list containing information on the process used to print the spots on the arrays (number of grid rows / columns and number of spot rows / columns per grid - coincides
printer列表,其中包含的信息用于阵列打印点(网格行/列和每个网格点行/列数数的过程 - 恰逢




genes  A data.frame containing information on each probe. Has the following columns:
genesAdata.frame每个探针包含的信息。下面几列:




Field field position for the probe
Field探针领域的地位




Meta Row meta row position for the probe
Meta Row元探针行的位置




Meta Column meta column position for the probe
Meta Column元列位置的探针




Row row position for the probe
Row探针行的位置




Column column position for the probe
Column列位置的探针




Gene ID unique gene identifier provided by Miltenyi Biotec
Gene ID天旎生物技术公司提供独特的基因标识




ID unique probe identifier constructed by concatentating the "Gene ID" with "Meta Row", "Meta Column",
ID独特的探针标识符,由concatentating“基因身份证”,“元行”,“元柱”建造,




Name name of the microRNA
Name名称的microRNA




Name.stem base name of the microRNA
Name.stem的microRNA的基本名称




probe.type type of probe, "MMU miRNAs", "Other
probe.type探针的类型,“MMU的微RNA”,“其他


Details

详情----------Details----------

RNA samples were isolated from mouse embryonic orofacial tissues (GD-12 - GD-14) and fluorescently labeled with Hy5 (red). Control samples (miRXplore Universal Reference) were labeled with  Hy3 (green).  The two sets of samples were hybridized to miRXplore Microarrays (Miltenyi Biotec) sing the a-Hyb Hybridization Station (Miltenyi Biotec). Probes for a total of 1336 mature miRNAs (from human, mouse, rat and virus), including positive control and calibration probes, were spotted in quadruplicate on each microarray. Each array included probes for 588 murine miRNAs.
RNA样品中分离出小鼠胚胎颜面部组织(GD-12  -  GD-14)和荧光标记HY5(红色)。 HY3(绿色)控制样品(miRXplore通用参考)标记。两套样品进行杂交miRXplore微阵列(美天旎生物技术)唱一个的HYB杂交站(天旎生物技术)。共有1336成熟的miRNA从人类,小鼠,大鼠和病毒,包括阳性对照和校正探针,探针被发现在每个芯片上的一式四份。每个阵列包含588小鼠miRNA的探针。


源----------Source----------

P. Mukhopadhyay, G. Brock, V. Pihur, C. Webb, M.M. Pisano, and R.M. Greene. Developmental microRNA expression profiling of murine embryonic orofacial tissue. Birth Defects Res A Clin Mol Teratol, 88(7):511-34, 2010.
P. Mukhopadhyay,G.布罗克,V. Pihur,C.韦伯,MM皮萨诺,以及R.M.格林。小鼠胚胎颜面部组织发展的microRNA表达谱。出生缺陷的水库一个临床分子Teratol,88(7):511-34,2010。


举例----------Examples----------


data(PalateData)

转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。


注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
注2:由于是机器人自动翻译,难免有不准确之处,使用时仔细对照中、英文内容进行反复理解,可以帮助R语言的学习。
注3:如遇到不准确之处,请在本贴的后面进行回帖,我们会逐渐进行修订。
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