mrnetb(minet)
mrnetb()所属R语言包:minet
Maximum Relevance Minimum Redundancy Backward
最大的关联性最小冗余向后
译者:生物统计家园网 机器人LoveR
描述----------Description----------
mrnetb takes the mutual information matrix as input in order to infer the network using the maximum relevance/minimum redundancy criterion combined with a backward elimination and a sequential replacement - see references. This method is a variant of mrnet.
mrnetb需要互信息矩阵作为输入,以推断出网络使用的最大相关性/最小冗余准则,结合了淘汰落后和顺序更换 - 请参阅参考资料。此方法是一种变种mrnet。
用法----------Usage----------
mrnetb(mim)
参数----------Arguments----------
参数:mim
A square matrix whose i,j th element is the mutual information between variables X_i and X_j - see build.mim.
一个方阵的我,第j个元素是变量之间的相互信息X_i和X_j - 看到build.mim。
值----------Value----------
mrnetb returns a matrix which is the weighted adjacency matrix of the network. In order to display the network, load the package Rgraphviz and use the following command: <br> plot( as( returned.matrix ,"graphNEL") )
mrnetb返回一个矩阵,这是网络的加权邻接矩阵。为了显示网络,加载包Rgraphviz和使用下面的命令:参考图((returned.matrix,“graphNEL”))
作者(S)----------Author(s)----------
Patrick E. Meyer
参考文献----------References----------
Information-Theoretic Inference of Gene Networks Using Backward Elimination. The 2010 International Conference on Bioinformatics and Computational Biology.
Information-theoretic inference of large transcriptional regulatory networks. EURASIP Journal on Bioinformatics and Systems Biology, 2007.
参见----------See Also----------
build.mim, clr, mrnet, aracne
build.mim,clr,mrnet,aracne
举例----------Examples----------
data(syn.data)
mim <- build.mim(syn.data, estimator="spearman")
net <- mrnetb(mim)
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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