maigesRelNetB-class(maigesPack)
maigesRelNetB-class()所属R语言包:maigesPack
maigesRelNetB class, store results of relevance network analysis (Butte's method)
maigesRelNetB类,存储相关的网络分析结果(小山的方法)
译者:生物统计家园网 机器人LoveR
描述----------Description----------
This class defines a structure to store the results of relevance network analysis, using a method that was proposed by Butte et al. (2000), see the reference below. Objects of this type are generated calling the function relNetworkB.
这个类定义了一个结构来存储相关的网络分析的结果,使用一个小山等提出的方法。 (2000年),见下面的参考。产生这种类型的对象调用函数relNetworkB。
Details
详情----------Details----------
Objects of this class are produced by calling the function relNetworkB over an object of class maiges to search for pairs of genes with significant correlation values in a specific sample type, according to the method proposed by Butte et al. (2000).
这个类的对象是通过调用函数relNetworkB一个类对象maiges搜索对具有显着的相关值,在一个特定的样本类型的基因,根据巴特等人所提出的方法。 (2000年)。
插槽----------Slots----------
W: numeric matrix giving the W values of the genes tested. This information is useful for doing plots representing the
W:数字矩阵,使基因的W值测试。这个信息是代表做图
Corr: numerical square matrix that store the
Corr:数值方阵存储
Pval: numerical square matrix that store the p-value
Pval:数值方形矩阵,存储的P-值
maxB: numerical square matrix that store the maximum (in absolute value) of the correlation values calculated by
maxB:最大的相关值(绝对值)计算,存储的数字方阵
type: character vector giving the name of sample
type:特征向量,使样本的名称
Slabel: string with the sample label used to define
Slabel:用于定义字符串与样品标签
Date: character string giving the date and time that
Date:字符串提供的日期和时间。
V.info: list containg three characters. The first one is a string containing the R version used when the object was created. The second is a char vector with base packages and the last one is another char vector with additional packages and
V.info:列表containg三个大字。第一个是一个字符串,其中包含创建对象时使用的R版本。第二个是基础包炭向量和最后一个字符向量和另一个额外的软件包
方法----------Methods----------
image signature(x = 'maigesRelNetB'): image method for maigesRelNetB class. Display colour representation of
图像signature(x = 'maigesRelNetB'):maigesRelNetB类图像的方法。显示颜色表示
plot signature(x = 'maigesRelNetB'): plot method for maigesRelNetB class. Display a circular graph
图signature(x = 'maigesRelNetB'):maigesRelNetB类的图方法。显示一个圆形图
print signature(x = 'maigesRelNetB'): print method for
打印signature(x = 'maigesRelNetB'):打印方法
show signature(x = 'maigesRelNetB'): show method for
显示signature(x = 'maigesRelNetB'):show方法
summary signature(x = 'maigesRelNetB'): summary method for
摘要signature(x = 'maigesRelNetB'):简易方法
作者(S)----------Author(s)----------
Gustavo H. Esteves <<a href="mailto:gesteves@vision.ime.usp.br">gesteves@vision.ime.usp.br</a>>
参考文献----------References----------
I.S. Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks. PNAS, 97, 12182-12186, 2000. (http://www.pnas.org/cgi/content/full/97/22/12182)
参见----------See Also----------
relNetworkB.
relNetworkB。
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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