getResults(macat)
getResults()所属R语言包：macat
Access results of 'evalScoring'
访问结果“evalScoring”
译者：生物统计家园网 机器人LoveR
描述----------Description----------
This function processes the result of the evalScoring function and returns a list of probe sets within chromosome regions deemed significant by MACAT. Additional annotation for these probe sets is provided along with their identifiers.
这个函数处理的evalScoring函数的结果，并返回由麦科特认为重要的染色体区域内的探针组名单。这些探针集提供额外的注释连同他们的标识。
用法----------Usage----------
getResults(MACATevalScoringOBJ)
参数----------Arguments----------
参数：MACATevalScoringOBJ
Object of class MACATevalScoring, usually the result from evalScoring
对象类MACATevalScoring，通常是从evalScoring
Details
详情----------Details----------
The p-values have been computed individually for probe sets (genes), not for whole chromosome regions. Thus, regions deemed significant by sliding window approach do not have to consist only of probe sets with low p-values. These probe-set p-values are not used to determine whether a region is considered significant or not. Instead the comparison between actual and interpolated scores to actual and interpolated boundaries determines whether a region is considered significant.
p值已单独计算探针组（基因），而不是整个染色体区域。因此，认为通过滑动窗口的方法显着的区域，不包括探针集低p值。不使用这些探针组的p值，以确定是否重大或不被视为一个区域。而是比较实际与插补实际分数和插值边界确定是否被认为是显着的区域。
This function is called within the plot function for the results of evalScoring, when HTML output is desired.
此功能称为内积函数的结果evalScoring，HTML输出时所需的。
值----------Value----------
A list with the following components, describing probe sets within chromosome regions deemed significant:
以下组件的列表，描述染色体区域内的探针集视为显著：
参数：probeID
IDs of probe sets within these chromosome regions
这些染色体区域内设置探针标识
参数：cytoband
chromosomal bands these probe sets have been annotated to
这些探针组染色体带已注明
参数：geneSYM
gene symbols these probe sets have been annotated to
基因符号，这些探针集已经注明
参数：pvalue
p-values for probe sets; see details
探针组的p值;查看详细信息
参数：locusid
EntrezGene-(formerly LocusLink) IDs of these probe sets
EntrezGene（原名LocusLink）IDS这些探针组
参数：genedescription
Description of genes the probe sets have been annotated to
基因探针组的说明注解
参数：probeScore
the differential expression scores for the probe sets
探针组的差异表达分数
参数：chromosome
chromosome, the analysis has been done for
染色体，已经做了分析
参数：class
sample class, the analysis has been done for
样本类，已经做了分析
作者（S）----------Author(s)----------
MACAT development team
参见----------See Also----------
evalScoring
evalScoring
举例----------Examples----------
data(stjd)
myevalres <- evalScoring(stjd, class="T", chromosome=6, nperms=10,
cross.validate=FALSE)
results <- getResults(myevalres)
summary(results)
results$probeID[1:20]
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
注2：由于是机器人自动翻译，难免有不准确之处，使用时仔细对照中、英文内容进行反复理解，可以帮助R语言的学习。
注3：如遇到不准确之处，请在本贴的后面进行回帖，我们会逐渐进行修订。
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发表于 2012-2-25 23:58:20
