qPCRraw(HTqPCR)
qPCRraw()所属R语言包:HTqPCR
Example raw qPCR data.
例如原料的qPCR数据。
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Six qPCR samples, performed on the TaqMan Low Density Arrays from Applied Biosystem. Each sample contains 384 PCR reactions, and there are 3 different samples with 2 replicates each. To be used as example data in the HTqPCR package.
六,执行上的TaqMan低密度阵列应用生物系统的定量PCR样品。每个样本包含384个PCR反应,2个重复每一个有3个不同的样本。被用作示例数据在HTqPCR包。
用法----------Usage----------
data(qPCRraw)
格式----------Format----------
An object of class qPCRset. The format is: Formal class 'qPCRset' [package ".GlobalEnv"] with 9 slots ..@ featureNames : chr [1:384] "Gene1" "Gene2" "Gene3" "Gene4" ... ..@ sampleNames : chr [1:6] "sample1" "sample2" "sample3" "sample4" ... ..@ exprs : num [1:384, 1:6] 11.5 33.9 28 26.9 25 ... .. ..- attr(*, "dimnames")=List of 2 .. .. ..$ : chr [1:384] "Gene1" "Gene2" "Gene3" "Gene4" ... .. .. ..$ : chr [1:6] "sample1" "sample2" "sample3" "sample4" ... ..@ flag :'data.frame': 384 obs. of 6 variables: .. ..$ V1: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... .. ..$ V2: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... .. ..$ V3: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... .. ..$ V4: chr [1:384] "Flagged" "Flagged" "Passed" "Passed" ... .. ..$ V5: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... .. ..$ V6: chr [1:384] "Passed" "Passed" "Passed" "Passed" ... ..@ featureType : Factor w/ 2 levels "Endogenous Control",..: 1 2 2 2 2 2 2 2 2 2 ... ..@ featurePos : chr [1:384] "A1" "A2" "A3" "A4" ... ..@ featureClass : Factor w/ 3 levels "Kinase","Marker",..: 3 3 2 1 2 3 1 3 3 3 ... ..@ featureCategory:'data.frame': 384 obs. of 6 variables: .. ..$ X1: chr [1:384] "OK" "OK" "OK" "OK" ... .. ..$ X2: chr [1:384] "OK" "OK" "OK" "OK" ... .. ..$ X3: chr [1:384] "OK" "OK" "OK" "OK" ... .. ..$ X4: chr [1:384] "OK" "OK" "OK" "OK" ... .. ..$ X5: chr [1:384] "OK" "OK" "OK" "OK" ... .. ..$ X6: chr [1:384] "OK" "OK" "OK" "OK" ... ..@ history :'data.frame': 1 obs. of 1 variable: .. ..$ history: chr "Default HTqPCR qPCRset object with raw data."
对象类qPCRset。格式是:正式类的qPCRset“包”GlobalEnv。“] 9槽.. @ featureNames:CHR [1:384]”Gene1“Gene2”,“Gene3”Gene4“... .. @ sampleNames:CHR [1:6]“SAMPLE1”的sample2“sample3”sample4“... .. @ exprs:NUM [1:384,1:6] 11.5 33.9 28 26.9 25 ... .. .. - ATTR(*,“dimnames”)= 2的名单...... .. CHR .. $:[1:384]“Gene1”Gene2“,”Gene3“Gene4”... .. .. CHR .. $:[1:6]“SAMPLE1”的sample2“sample3”sample4“... .. @标志:“数据框”:384 OBS。 6个变量:...... .. $ V1:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. .. $ V2:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. .. $ V3的:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. .. $ V4的:CHR [1:384]“标记”,“标记”,“通过”,“合格”... .. .. $ V5:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. .. $ V6:CHR [1:384]“合格”,“合格”,“合格”,“传递”... .. @ featureType因素W / 2级“内对照”,..:1 2 2 2 2 2 2 2 2 2 ... .. @ featurePos:CHR [1:384]“格A1”的“A2”的“A3”“A4纸”... .. @ featureClass因素W / 3水平“激酶”,“标记”,..:3 3 2 1 2 3 1 3 3 3 ... .. @ featureCategory:“数据框:384 OBS。 6个变量:...... .. $ X1:CHR [1:384]“确定”“确定”“确定”“确定”... .. .. $ X2:CHR [1:384]“确定”“确定”“确定”“确定”... .. .. $ X3:CHR [1:384]“确定”“确定”“确定”“确定”... .. .. $ X4:CHR [1:384]“确定”“确定”“确定”“确定”... .. .. $ X5:CHR [1:384]“OK”确定“”确定“”确定“... .. .. $ 5233:CHR [1:384]“确定”“确定”“确定”“确定”... .. @历史:“数据框”:1 OBS。 1变量:.. ..美元的历史:CHR“的默认HTqPCR qPCRset与原始数据的对象。”
举例----------Examples----------
data(qPCRraw)
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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