GeneRanking-class(GeneSelector)
GeneRanking-class()所属R语言包:GeneSelector
"GeneRanking"
“GeneRanking”
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Object returned by all implemented ranking methods (RankingTstat, RankingFC, RankingWelchT, RankingWilcoxon, RankingBaldiLong, RankingFoxDimmic, RankingLimma, RankingEbam, RankingWilcEbam, RankingSam, RankingShrinkageT, RankingSoftthresholdT,
返回的对象(RankingTstat,RankingFC,RankingWelchT,RankingWilcoxon,RankingBaldiLong,RankingFoxDimmic,RankingLimma,RankingEbam,RankingWilcEbam,RankingSam,RankingShrinkageT,RankingSoftthresholdT所有实施的排名方法,
插槽----------Slots----------
x: Gene expressionmatrix rows correspond to genes, columns to samples (arrays).
x:基因表达matrix行对应的基因,列样本(阵列)。
y: A two-level factor of class labels.
y:两个级别的factor类标签。
statistic: A numeric vector storing the test statistics.
statistic:numeric向量存储的测试统计。
ranking: The ranking is determined via the statistic (normally via the size of absolute value). The lower the rank, the higher the magnitude of differential expression.
ranking:排名是通过统计(通常是通过绝对值的大小)决定。排名越低,差异表达的震级越高。
pval: The vector of p-values computed from statistic.<br>
pval:从statistic计算p值向量参考。
type: Type of the test (one of "unpaired", "paired",
type:测试类型(之一“unpaired”“paired”
method: Short name of the ranking method.
method:短名字的排序方法。
方法----------Methods----------
show Use show(GeneRanking-object) for brief information.
显示使用简要信息show(GeneRanking-object)。
summary Use summary(GeneRanking-object) for a five-point-summary of statistics and p-values arranged as two-column table. The second column (p-values) are NA
总结使用summary(GeneRanking-object)的安排为两列的表的统计和p值五点总结。第二列(p值)NA
toplist Use toplist(object, k=10)
的toplist使用toplist(object, k=10)
作者(S)----------Author(s)----------
Martin Slawski <br>
Anne-Laure Boulesteix
参见----------See Also----------
RepeatRanking
RepeatRanking
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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