timeLinePlot-methods(flowViz)
timeLinePlot-methods()所属R语言包：flowViz
Plot channel values against time
对时间的图通道值
译者：生物统计家园网 机器人LoveR
描述----------Description----------
Plots values of one parameter for each flowFrame in a
图一个参数值中的每一个flowFrame
Details
详情----------Details----------
Plotting flow cytometry data against the time domain can help to identify problems with the fluidics or drifts in the instrument setting during measurement runs.
图对流式单元仪的时域数据可以帮助确定在测量过程中运行的流体或仪器设置的漂移问题。
This function creates plots for all flowFrames in a flowSet for a given parameter against time. A barplot legend indicates the deviation from the median for each sample. There is also a flowFrame method, which will create a plot for a single flowFrame only.
这个函数创建在一个给定的参数与时间flowSet所有flowFrames图。一个barplot传说表明从每个样品中位数偏差。也是flowFrame的方法，这将创建一个只有一个单一的flowFrame图。
In addition, the function computes a quality score for each frame, which essentially is the sum of the positive distances of each bin mean from a frame-specific confidence interval, divided by the number of bins. Values larger than zero indicate a problem.
此外，该函数计算每一帧的质量得分，这实际上意味着从一个框架，具体的置信区间数除以箱，是每个容器的正面距离的总和。值大于零，说明一个问题。
值----------Value----------
A numeric vector of quality scores.
一个数字的质量分数向量。
方法----------Methods----------
General usage:
一般用法：
timeLinePlot(x, channel, type=c("stacked", "scaled", "native"), col, ylab=names(x), binSize, varCut=1, ...)
timeLinePlot(x, channel, type=c("stacked", "scaled", "native"), col, ylab=names(x), binSize, varCut=1, ...)
x An object of class flowFrame or
x一个类的对象flowFrame
channel The parameter for which the data is to be plotted
要绘制的数据通道的参数
type One in 'stacked', 'scaled' or 'native'. 'stacked' will plot the measurements for the frames on top of each other. 'scaled' will align the median values around zero and 'native' will plot the values in the original dimensions of the
键入一个堆叠，规模或本土。 “叠”将在彼此顶部的帧绘制的测量。 “规模”将调整在零附近的中值和本土的原始尺寸绘制的值
col Optional color parameter.
山坳可选颜色参数。
ylab The axis annotation to add on the y-axis for stacked
ylab轴标注为堆叠上添加Y轴
binSize The number of events per bin. If not set, a reasonable
binSize每斌事件。如果没有设置，合理
varCut The cutoff in the adjusted variance to which the quality score is computed. Basically, all values that are outside of the confidence interval defined by \[my - signma * varCut, my + sigma * varCut\] will contribute to a positive
varCut的质量得分计算，在调整后的方差截止。基本上，\[my - signma * varCut, my + sigma * varCut\]定义的置信区间之外的所有值将有助于积极
... Further arguments that are passed on to the base plotting
...进一步的参数传递到碱基策划
x = "ANY", channel = "missing" This casts a useful error
=“任何”，通道=“失踪”，投下了一个有用的错误
x = "flowFrame", channel = "character" For a flowFrame we only plot a single parameter
x =“flowFrame”，通道=“字符”对于一个flowFrame我们只绘制一个参数
x = "flowSet", channel = "character" For a flowSet, we plot the lines for a single parameter
X =“flowSet”，通道=“字符”对于一个flowSet，我们绘制一个参数线
作者（S）----------Author(s)----------
F. Hahne
参见----------See Also----------
flowFrame, flowSet
flowFrame，flowSet
举例----------Examples----------
data(GvHD)
opar <- par(ask=TRUE)
res <- timeLinePlot(GvHD[[1]], "SSC-H")
res
res <- timeLinePlot(GvHD, "SSC-H")
res <- timeLinePlot(GvHD, "SSC-H", type="scaled", varCut=4)
res <- timeLinePlot(GvHD[1:4], "SSC-H", type="native", binSize=50)
par(opar)
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
注2：由于是机器人自动翻译，难免有不准确之处，使用时仔细对照中、英文内容进行反复理解，可以帮助R语言的学习。
注3：如遇到不准确之处，请在本贴的后面进行回帖，我们会逐渐进行修订。
|
发表于 2012-2-25 18:15:08
