edgeR-package(edgeR)
edgeR-package()所属R语言包:edgeR
Empirical analysis of digital gene expression data in R
在R数字基因表达数据的实证分析
译者:生物统计家园网 机器人LoveR
描述----------Description----------
edgeR is a library for the analysis of digital gene expression data arising from RNA sequencing technologies such as SAGE, CAGE, Tag-seq or RNA-seq, with emphasis on testing for differential expression.
磨边机是数字基因表达产生的RNA测序技术,如鼠尾草,笼,TAG-SEQ或RNA-seq的重点是差异表达的测试,数据分析库。
Particular strengths of the package include the ability to estimate biological variation between replicate libraries, and to conduct exact tests of significance which are suitable for small counts. The package is able to make use of even minimal numbers of replicates.
包的特定优势,包括能力估计复制库之间的变异生物,并进行精确测试的意义,这是适合小计数。该软件包是能够让即使是最小的数字复制使用。
A User's Guide is available as well as the usual help page documentation for each of the individual functions.
用户指南以及平时帮助每个个别功能的页面文件。
The library implements statistical methodology developed by Robinson and Smyth (2007, 2008).
库实现了由罗宾逊和史密斯(2007年,2008年)开发的统计方法。
作者(S)----------Author(s)----------
Mark Robinson <mrobinson@wehi.edu.au>, Davis McCarthy <dmccarthy@wehi.edu.au>, Gordon Smyth
参考文献----------References----------
assessing differences in tag abundance. Bioinformatics 23, 2881-2887
binomial dispersion, with applications to SAGE data. Biostatistics, 9, 321-332
package for differential expression analysis of digital gene expression data. Bioinformatics 26, 139-140
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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