addFeatureData(beadarray)
addFeatureData()所属R语言包:beadarray
Add probe data
新增探测数据
译者:生物统计家园网 机器人LoveR
描述----------Description----------
Adds extra probe-specific data to an ExpressionSetIllumina object.
增加了额外的探针具体数据到ExpressionSetIllumina对象。
用法----------Usage----------
addFeatureData(data, toAdd = c("SYMBOL", "PROBEQUALITY", "CODINGZONE", "PROBESEQUENCE"), annotation = NULL)
参数----------Arguments----------
参数:data
An ExpressionSetIllumina object
一个ExpressionSetIllumina对象
参数:toAdd
Either a pre-prepared data frame, or characters which refer to mappings within an annotation pacakge
无论是预先准备好的数据框,或者是指内注释pacakge,映射的字符
参数:annotation
Optional character identifying the annotation of the ExpressionSetIllumina object. e.g. Humanv3, Mousev2.
可选字符识别的ExpressionSetIllumina对象的注释。例如humanv3,Mousev2。
Details
详情----------Details----------
The function will identify which package should be used by concatenating illumina with the value of the annotation slot of the object, or the annotation argument passed in. If this package is not installed on the users computer, then the function will fail.
该函数将确定哪些包应该通过连接对象的注解槽的值,或标注的参数传入,如果用户的计算机上安装了这个包不Illumina的使用,则该函数将失败。
Assuming the package has been correctly loaded, the character vector toAdd is converted to the names of environments within the package. These environments are then queried with the featureNames of the input object. The result of each query is converted to a data frame and merged with the original feature data of the object.
假设包已经正确加载,特征向量toAdd转换包内的环境的名称。这些环境中,然后与输入对象featureNames的质疑。每个查询的结果被转换为一个数据框和合并对象的原始特征数据。
Alternatively, rather than querying from an annotation pacakge, a pre-prepared data frame can be used.
另外,而比注释pacakge的查询,预先准备好的数据框可以使用。
值----------Value----------
An ExpressionSetIllumina object with modified featureData
一个与改良featureData ExpressionSetIllumina对象
举例----------Examples----------
if(require(beadarrayExampleData)){
data(exampleSummaryData)
exampleSummaryData <- addFeatureData(exampleSummaryData)
}
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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