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IDconvert各种生物数据ID转化的工具

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发表于 2010-6-22 19:58:08 | 显示全部楼层 |阅读模式
  当您查询数据库的时候,您可能觉得不同的数据库所用的ID各不相同,会让你觉得很烦人,没关系,这里有个非常好用的网站程序LIDconvert,可以再不同的ID直接相互转换,很方便的,主要转化的ID有

目前提供人,小鼠、大鼠三种生物,若干种ID之间的转换
http://idconverter.bioinfo.cnio.es/


可转换的ID包括如下几方面:

Gene Level
UniGene Cluster   
Taken from UniGene
Gene Description
Taken from UniGene
Gene Name
Taken from UniGene
EntrezGene
Taken from UniGene
Ensembl Gene
Taken from Ensembl
RefSeq_RNA
Taken from Ensembl
RefSeq_peptide
Taken from Ensembl
CCDS
Taken from Ensembl
Gene Location
Ensembl

UCSC*

Ensembl*
If inexistent, uses UCSC
UCSC*
If inexistent, uses Ensembl
Clone Level
CNIO ID
CNIO Clone Tracking Database
Clone ID
Taken from UniGene
GenBank Accession
Taken from UniGene
Affymetrix ID
Taken from Ensembl
Protein Level
SwissProt
Taken from Ensembl
Embl
Taken from Ensembl
PDB id
Taken from Ensembl
IPI
Taken from Ensembl
OMIM*
Taken from Ensembl
Functional Level
GO
Taken from Ensembl
KEGG Pathways
Taken from KEGG
Reactome Pathway
Taken from Reactome
Reactome Reaction
Taken from Reactome
PubMed id
Taken from NCBI



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