A list-based class for storing the analysis results from the multivariate empirical Bayes models of differential expression for longitudinal replicated developmental microarray time course data. Objects are normally created by mb.long and mb.MANOVA.
一个基于列表的类，用于存储从多元的经验Bayes模型的差异表达纵向复制的发展芯片的时间当然数据的分析结果。对象通常创建mb.long和mb.MANOVA。
槽/组件----------Slots/Components----------
MArrayTC objects do not contain any slots (apart from .Data) but they should contain the following list components:
MArrayTC对象不包含任何插槽（除了.Data），但他们应该包含下面的列表组件：
M: input matrix of log-ratios or log-values of
M：输入matrixlog或记录值的比率
Objects may also contain the following optional components:
对象还可以包含以下可选组件：
prop: numeric value giving the proportion of
prop：numeric值给出比例
nu: numeric value containing the estimated
nu：numeric值，其中包含的估计
Lambda: the estimated Lambda.
Lambda：估计的Lambda。
Lambda1: the estimated Lambda1.
Lambda1：估计Lambda1。
eta: the estimated prior scale parameter.
eta：事先估计尺度参数。
alpha: the estimated common
alpha：共同的估计
alpha.d: the estimated condition-specific
alpha.d：估计的特定条件
beta: the estimated scale parameter for the common covariance matrix of the common expected time course
beta：为尺度参数估计的共同预期的时间当然共同的协方差矩阵
beta.d: the estimated condition-specific scale parameters for the common covariance matrix of the expected time course vectors under
beta.d：估计预期的时间当然向量的共同协方差矩阵的特定条件下尺度参数
percent: numeric matrix containing the percent of moderation
percent：numeric矩阵，包含适度％
size: numeric vector or matrix containing the sample sizes for all genes corresponding to different biological conditions, when the latter are sorted in ascending
size：numeric向量或矩阵包含所有基因样本大小对应不同的生物条件，后者是按升序排序
con.group: numeric or character vector giving the biological condition group of each array. The i_th element of con.group corresponds to the
con.group：numeric或character向量，使每个阵列生物条件组。 i_th con.group元素对应
rep.group: numeric or character vector giving the replicate group of each array. The i_th element of rep.group corresponds to the
rep.group：numeric或character向量，使每个阵列的复制组。 i_th rep.group元素对应
time.group: numeric vector giving the time group of each array. The i_th element of time.group corresponds to the
time.group：numeric给每个阵列组的向量。 i_th time.group元素对应
HotellingT2: numeric vector giving the
HotellingT2：numeric向量给予
MB: numeric vector giving the MB-statistics of differential expression.
MB：numeric向量，使差异表达的MB-统计。
pos.HotellingT2: numeric vector whose i_th element corresponds to
pos.HotellingT2：numeric向量的i_th元素对应
pos.MB: numeric vector whose i_th element corresponds to
pos.MB：numeric向量的i_th元素对应
geneNames: character vector giving gene names.
geneNames：character向量使基因名称。
descriptions: character vector giving gene descriptions.
descriptions：character向量使基因的描述。
方法----------Methods----------
MArrayTC extends the LargeDataObject class in package limma, and inherits a show method from there.
MArrayTC扩展包limmaLargeDataObject类，并继承了有方法show。
The function plotProfile takes MArrayTC as the input argument.
的功能plotProfile需MArrayTC作为输入参数。
作者（S）----------Author(s)----------
Yu Chuan Tai <a href="mailto:yuchuan@stat.berkeley.edu">yuchuan@stat.berkeley.edu</a>
发表于 2012-2-26 15:37:17
