ExpressionTimeSeries-class(tigre)
ExpressionTimeSeries-class()所属R语言包：tigre
Class to contain time series expression assays
一类包含时间序列表达分析
译者：生物统计家园网 机器人LoveR
描述----------Description----------
Container for time series expression assays and experimental metadata. ExpressionTimeSeries class is derived from ExpressionSet, and requires fields
时间序列表达分析和实验的元数据的容器。 ExpressionTimeSeriesExpressionSet类派生，并要求领域
延伸----------Extends----------
Directly extends class ExpressionSet.
直接延伸类ExpressionSet。
类的对象----------Objects from the Class----------
new("ExpressionTimeSeries")
new("ExpressionTimeSeries")
new("ExpressionTimeSeries", phenoData = new("AnnotatedDataFrame"), featureData = new("AnnotatedDataFrame"), experimentData = new("MIAME"), annotation = character(0), protocolData = phenoData[,integer(0)], exprs = new("matrix"), var.exprs = new("matrix"))
new("ExpressionTimeSeries", phenoData = new("AnnotatedDataFrame"), featureData = new("AnnotatedDataFrame"), experimentData = new("MIAME"), annotation = character(0), protocolData = phenoData[,integer(0)], exprs = new("matrix"), var.exprs = new("matrix"))
This creates an ExpressionTimeSeries with assayData implicitly created to contain exprs and var.exprs.
这将创建一个ExpressionTimeSeries隐式创建包含assayData和exprs的var.exprs。
new("ExpressionTimeSeries", assayData = assayDataNew(exprs=new("matrix")), phenoData = new("AnnotatedDataFrame"), featureData = new("AnnotatedDataFrame"), experimentData = new("MIAME"), annotation = character(0), protocolData = phenoData[,integer(0)])
new("ExpressionTimeSeries", assayData = assayDataNew(exprs=new("matrix")), phenoData = new("AnnotatedDataFrame"), featureData = new("AnnotatedDataFrame"), experimentData = new("MIAME"), annotation = character(0), protocolData = phenoData[,integer(0)])
This creates an ExpressionTimeSeries with assayData provided explicitly. In this form, the only required named argument is assayData.
这创建与ExpressionTimeSeries提供了明确的assayData。在这种形式下，只需要命名参数是assayData。
ExpressionTimeSeries instances are usually created through new("ExpressionTimeSeries", ...). Usually the arguments to new include exprs (a matrix of expression data, with features corresponding to rows and samples to columns), var.exprs, phenoData, featureData, experimentData, annotation, and protocolData. phenoData, featureData, experimentData, annotation, and protocolData can be missing, in which case they are assigned default values.
ExpressionTimeSeries实例通常是创建new("ExpressionTimeSeries", ...)。一般new参数exprs（与相应的行和列样品的特点，表达数据矩阵），var.exprs，phenoData，featureData experimentData，annotation，protocolData。 phenoData，featureData，experimentData，annotation，protocolData可以丢失，在这种情况下，他们被分配默认值。
插槽----------Slots----------
assayData: Inherited from ExpressionSet. The models in gpsim package assume that exprs contains absolute (i.e. non-logarithmic) expression values.
assayData：ExpressionSet继承。 gpsim包中的模型假设，exprs包含绝对的（即非数）表达式的值。
phenoData: Inherited from ExpressionSet. The following fields are required: experiments which contains integers from 1 to N with measurements from the same biological assay having the same number; modeltime which contains observation times in model units.
phenoData：ExpressionSet继承。以下字段是必需的：experiments其中包含从相同的生物检测具有相同数量的测量从1到N的整数;modeltime其中包含在示范单位的观测时间。
featureData: Inherited from ExpressionSet.
featureData：ExpressionSet继承。
experimentData: Inherited from ExpressionSet.
experimentData：ExpressionSet继承。
annotation: Inherited from ExpressionSet.
annotation：ExpressionSet继承。
protocolData: Inherited from ExpressionSet.
protocolData：ExpressionSet继承。
.__classVersion__: Inherited from ExpressionSet.
.__classVersion__：ExpressionSet继承。
方法----------Methods----------
See also methods for ExpressionSet.
ExpressionSet看到同样的方法。
var.exprs(object), var.exprs(object)<- value Access and set var.exprs
var.exprs(object)，var.exprs(object)<- value访问和一套var.exprs
initialize("ExpressionTimeSeries") Object instantiation, used by new; not to be called directly by the user.
initialize("ExpressionTimeSeries")对象的实例，通过新的使用;不得由用户直接调用。
作者（S）----------Author(s)----------
Antti Honkela, Jonatan Ropponen
参见----------See Also----------
processData, processRawData.
processData，processRawData。
举例----------Examples----------
showClass("ExpressionTimeSeries")
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
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发表于 2012-2-26 15:31:14
