plotPredMap(SQUADD)
plotPredMap()所属R语言包:SQUADD
Prediction map
预测图
译者:生物统计家园网 机器人LoveR
描述----------Description----------
This method is used to visualize the prediction heat-map. The prediction map is generated by mapping a color code on the ratio of the fitted values.
此方法用于可视化的预测热图。预测图所产生的颜色代码映射拟合值的比例。
用法----------Usage----------
plotPredMap(object)
参数----------Arguments----------
参数:object
object of the Class SquadSimResServiceImpl.
对象类SquadSimResServiceImpl。
Details
详情----------Details----------
This method firstly interpolate the SQUAD Simulation Result. Then, it performs a ratio at a user-defined time point. Finally, a color code is assigned to the ratio value. The darker the color, the higher the increase of the node activation.
该方法首先插队内模拟结果。然后,它执行比在一个用户定义的时间点。最后,颜色代码被分配到的比率值。颜色越深,较高的节点激活增加。
作者(S)----------Author(s)----------
Martial Sankar
参见----------See Also----------
More information about heatmap, heatmap More specific information in plotPredMap-methods. For more informations about the input object see SquadSimResServiceImpl-class.
约热图更多信息,heatmapplotPredMap-methods更具体的信息。有关输入对象的更多信息,请参阅SquadSimResServiceImpl-class。
举例----------Examples----------
fpath <- system.file("extdata", package="SQUADD")
fileModel <- file.path(fpath,"data_IAA")
nm <- c("ARF(a)", "ARF(i)", "AR_Genes", "Aux/IAA", "BES1/BZR1",
"BIN2", "BR", "BRI1-BAK1","BRR_Genes","BRX","BR_Biosynthesis", "BZR1", "DO",
"IAA", "IAA_Biosynthesis", "NGA1", "PIN", "SCFTir1","StimAux", "StimBR")
t <- 50
## call constructor[#调用构造函数]
obj <- simResService(
folder=fileModel,
time=t,
ncolor=5,
legend=nm,
indexDeno=1,
method="lowess")
## Apply method [应用方法]
plotPredMap(obj)
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注:
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