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R语言 snpStats包 GlmTests-class()函数中文帮助文档(中英文对照)

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发表于 2012-2-26 14:43:25 | 显示全部楼层 |阅读模式
GlmTests-class(snpStats)
GlmTests-class()所属R语言包:snpStats

                                        Classes "GlmTests" and "GlmTestsScore"
                                         班“GlmTests”和“GlmTestsScore”

                                         译者:生物统计家园网 机器人LoveR

描述----------Description----------

Classes of objects created by snp.lhs.tests and  snp.rhs.tests. The class "GlmTestsScore" extends the class "GlmTests" and is invoked by setting the argument score=TRUE when calling testing functions in order to save the scores and their variances (and covariances)
类snp.lhs.tests和snp.rhs.tests创建的对象。类"GlmTestsScore"扩展类"GlmTests",并通过设置参数调用score=TRUE调用测试功能时,为了节省的成绩和他们的差异(和协)


类的对象----------Objects from the Class----------

Objects of class "GlmTests" have four slots:
对象类"GlmTests"有四个插槽:




snp.names When only single SNPs are tested, a  character vector of SNP names. Otherwise a list
snp.names当只有单一的单核苷酸多态性进行测试,特征向量的SNP名称。否则列表




var.names A character vector containing names of variables
var.names包含变量名的一个特征向量




chisq A numerical vector of chi-squared test values
chisq一个卡方检验值的数值向量




df An integer vector of degrees of freedom for the tests
登发自由度的整数向量测试




N A integer vector of the number of samples contributing to
NA整数向量贡献的样本数量

The "GlmTestsScore" class extends this, adding a slot score containing a list with elements which are themselves lists with two elements:
"GlmTestsScore"类扩展了这个,增加一个插槽score包含一个元素本身有两个元素,列出列表:




U The vector (or matrix) of efficient scores
ü高效的得分向量(或矩阵)




V The upper triangle of the variance-covariance matrix of
V的协方差矩阵的上三角


方法----------Methods----------




[] signature(x = "GlmTests", i = "ANY", j =
[]的<code>签名(X =的“GlmTests”,“任何”,J =




coerce signature(from = "GlmTests", to = "data.frame"):
强制signature(from = "GlmTests", to = "data.frame"):




chi.squared signature(x = "GlmTests", df =
chi.squared的<code>签名(X =的“GlmTests”,DF =




deg.freedom signature(x = "GlmTests"): Extract
deg.freedomsignature(x = "GlmTests"):提取




names signature(x="GlmTests"): Extract (or generate)
名称signature(x="GlmTests"):提取(或产生)




p.value signature(x = "GlmTests", df =
p.value的<code>签名(X =的“GlmTests”,DF =




sample.size signature(object = "GlmTests"):
sample.sizesignature(object = "GlmTests"):




show signature(object = "GlmTests"): Show method
显示的signature(object = "GlmTests"):显示方法




summary signature(object = "GlmTests"): Summary
摘要signature(object = "GlmTests"):总结




[] signature(x = "GlmTestsScore", i = "ANY", j =
[]的<code>签名(X =“GlmTestsScore”,我=“任何”,J =




effect.sign signature(x = "GlmTestsScore", simplify =         "logical"): Extract signs of associations. If simpify is
effect.signsignature(x = "GlmTestsScore", simplify =         "logical"):提取关联的迹象。如果simpify




pool2 signature(x = "GlmTestsScore", y =         "GlmTestsScore", score = "logical"): Combine results from two
POOL2signature(x = "GlmTestsScore", y =         "GlmTestsScore", score = "logical"):合并两个




switch.alleles signature(x = "GlmTestsScore", snps =         "character"): Emulate, in the score vector and its (co)variances,
switch.allelessignature(x = "GlmTestsScore", snps =         "character"):仿真中的得分向量(CO)的差异,


注意----------Note----------

Most of the methods for this class are shared with the SingleSnpTests and SingleSnpTestsScore classes
这个类的方法SingleSnpTests和SingleSnpTestsScore类共享


作者(S)----------Author(s)----------


David Clayton <a href="mailto:david.clayton@cimr.cam.ac.uk">david.clayton@cimr.cam.ac.uk</a>



参见----------See Also----------

snp.lhs.tests,snp.rhs.tests, SingleSnpTests, SingleSnpTestsScore
snp.lhs.tests,snp.rhs.tests,SingleSnpTests,SingleSnpTestsScore


举例----------Examples----------


showClass("GlmTests")

转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。


注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
注2:由于是机器人自动翻译,难免有不准确之处,使用时仔细对照中、英文内容进行反复理解,可以帮助R语言的学习。
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