accessors(ShortRead)
accessors()所属R语言包:ShortRead
Accessors for ShortRead classes
为ShortRead类的存取
译者:生物统计家园网 机器人LoveR
描述----------Description----------
These functions and generics define "accessors" (to get and set values) for objects in the ShortRead package; methods defined in other packages may have additional meaning.
这些功能和泛型定义ShortRead包中的对象“存取”(获取和设置值);其他包中定义的方法可能有额外的意义。
用法----------Usage----------
## SRVector
vclass(object, ...)
## ShortRead / ShortReadQ
sread(object, ...)
id(object, ...)
## AlignedRead
chromosome(object, ...)
position(object, ...)
alignQuality(object, ...)
alignData(object, ...)
## Solexa
experimentPath(object, ...)
dataPath(object, ...)
scanPath(object, ...)
imageAnalysisPath(object, ...)
baseCallPath(object, ...)
analysisPath(object, ...)
## SolexaSet
solexaPath(object, ...)
laneDescription(object, ...)
laneNames(object, ...)
参数----------Arguments----------
参数:object
An object derived from class ShortRead. See help pages for individual objects, e.g., ShortReadQ. The default is to extract the contents of a slot of the corresponding name (e.g., slot sread) from object.
来自一个对象类ShortRead。请参阅帮助页面为单个对象,例如,ShortReadQ。默认是从sread提取相应的名称插槽的内容(例如,槽object)。
参数:...
Additional arguments passed to the accessor. The default definitions do not make use of additional arguments.
额外的参数传递给存取。默认的定义不使用额外的参数。
值----------Value----------
Usually, the value of the corresponding slot, or other simple content described on the help page of object.
通常情况下,相应的插槽,或其他简单的内容描述上object帮助页。
作者(S)----------Author(s)----------
Martin Morgan
举例----------Examples----------
sp <- SolexaPath(system.file('extdata', package='ShortRead'))
experimentPath(sp)
basename(analysisPath(sp))
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注:
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