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R语言 PREDA包 StatisticsForPREDA-class()函数中文帮助文档(中英文对照)

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发表于 2012-2-26 11:26:09 | 显示全部楼层 |阅读模式
StatisticsForPREDA-class(PREDA)
StatisticsForPREDA-class()所属R语言包:PREDA

                                        Class "StatisticsForPREDA" is used to manage the datamatrix containing statistics for PREDA analyses
                                         类“StatisticsForPREDA”用于管理的DataMatrix包含普雷达分析统计

                                         译者:生物统计家园网 机器人LoveR

描述----------Description----------

This class is used to manage the datamatrix containing statistics for PREDA analyses: i.e. the gene (or other genomic feature) centered statistics accounting for differential expression
这个类用于管理的DataMatrix普雷达分析统计:即基因(或其他基因的功能)中心统计核算的差异表达


类的对象----------Objects from the Class----------

Objects can be created by calls of the form new("StatisticsForPREDA", ids, statistic, analysesNames, testedTail).
创建对象可以通过检测的形式new("StatisticsForPREDA", ids, statistic, analysesNames, testedTail)。


插槽----------Slots----------




ids: Object of class "character" a character vector of unique identifiers for the genomic features under investigation
ids:对象类的"character"正在调查中的基因组功能的唯一标识符的字符向量




statistic: Object of class "matrix" a numeric matrix containing gene-centered statistics (or statistics on genomic data centered on other genomic features under investigation). The statistics must be provided as a matrix of numeric values, with a number of rows equal to the length of "ids" slot and a number of columns equal
statistic:Object类的"matrix"数字矩阵,含有基因中心的统计数据(或集中在受调查的其他基因组功能基因组数据的统计资料)。必须提供的统计数据作为一个数值矩阵,与行数等于“IDS”槽的长度和列数相等




analysesNames: Object of class "character" a character vector of unique names associated to each column of statistic matrix.
analysesNames:Object类的"character"一个独特的名称相关的统计矩阵的每一列的特征向量。




testedTail: Object of class "character" a character describing what tail of the statistic distribution will be analyzed during PREDA analysis. Possible values are "upper", "lower" or "both". Anyway we strongly recommend using PREDA analysis only
testedTail:Object类的"character"字符描述普雷达分析分析什么样的统计分布的尾部将在。可能的值是“上层”,“低”或“both”。总之,我们强烈建议使用普雷达分析


方法----------Methods----------




analysesNames signature(.Object = "StatisticsForPREDA"): get the names of the analyses in the StatisticsForPREDA object
analysesNamessignature(.Object = "StatisticsForPREDA"):分析在StatisticsForPREDA对象的名称




getStatisticByName signature(.Object = "StatisticsForPREDA"): extract data for individual analyses using the analysis name
getStatisticByNamesignature(.Object = "StatisticsForPREDA"):个别分析提取数据使用分析名称




initialize signature(.Object = "StatisticsForPREDA"): initialize method for StatisticsForPREDA objects
初始化signature(.Object = "StatisticsForPREDA"):StatisticsForPREDA对象的初始化方法




StatisticsForPREDA2dataframe signature(.Object = "StatisticsForPREDA"): extract data as a dataframe with probeids as rownames
StatisticsForPREDA2dataframesignature(.Object = "StatisticsForPREDA"):作为一个与作为rownames probeids dataframe提取数据




StatisticsForPREDAFilterColumns_neg signature(.Object = "StatisticsForPREDA"): filter statistics to remove selected analyses
StatisticsForPREDAFilterColumns_negsignature(.Object = "StatisticsForPREDA"):过滤器统计,删除选定的分析




StatisticsForPREDAFilterColumns_pos signature(.Object = "StatisticsForPREDA"): filter statistics to keep selected analyses
StatisticsForPREDAFilterColumns_possignature(.Object = "StatisticsForPREDA"):过滤选定的统计分析,以保持


注意----------Note----------

This class is better described in the package vignette
这个类是更好地描述包中的小插曲


作者(S)----------Author(s)----------


Francesco Ferrari



参见----------See Also----------

"DataForPREDA",  analysesNames,getStatisticByName StatisticsForPREDA2dataframe, StatisticsForPREDAFilterColumns_neg,StatisticsForPREDAFilterColumns_pos
"DataForPREDA",analysesNames,getStatisticByNameStatisticsForPREDA2dataframe,StatisticsForPREDAFilterColumns_neg,StatisticsForPREDAFilterColumns_pos


举例----------Examples----------


showClass("StatisticsForPREDA")

转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。


注:
注1:为了方便大家学习,本文档为生物统计家园网机器人LoveR翻译而成,仅供个人R语言学习参考使用,生物统计家园保留版权。
注2:由于是机器人自动翻译,难免有不准确之处,使用时仔细对照中、英文内容进行反复理解,可以帮助R语言的学习。
注3:如遇到不准确之处,请在本贴的后面进行回帖,我们会逐渐进行修订。
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