R语言 pint包 GenomeModels-class()函数中文帮助文档(中英文对照)

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GenomeModels-class(pint)
GenomeModels-class()所属R语言包：pint

                                        Class "GenomeModels"
                                         类“GenomeModels”

                                         译者：生物统计家园网 机器人LoveR

描述----------Description----------

Collection of dependency models fitting two data sets in whole genome. The dependency models are in a list of ChromosomeModelss (which represents each chromosome) that have a list of dependency models in that chromosomal
依赖模型拟合两个数据收集设置在整个基因组。依赖模型列表（这代表每条染色体）的ChromosomeModelss有依赖模型，在该染色体列表


类的对象----------Objects from the Class----------

Function screen.cgh.mrna and screen.cgh.mir returns an object of this class.
功能screen.cgh.mrna和screen.cgh.mir返回这个类的对象。


插槽----------Slots----------




chromosomeModels a list of ChromosomeModels of all chromosomes
一个列表chromosomeModels所有染色体ChromosomeModels的




method a string with name of the method used in dependency model
方法依赖模型中所使用的方法的名称字符串




params a list of parameters of the method
PARAMS的参数列表的方法


方法----------Methods----------




[[ signature(x = "GenomeModels"): Returns a ChromosomeModels from the list. X and Y chromosomes can be accessed with 23 and 24 or
[signature(x = "GenomeModels")：返回从列表ChromosomeModels的。 X和Y染色体可以23和24或访问




[[<- signature(x = "GenomeModels"): Attaches a ChromosomeModels to the list. X and Y chromosomes can be accessed with 23 and 24 or 'X' and
[< - signature(x = "GenomeModels")：附加ChromosomeModels列表。 X和Y染色体，可以访问23和24或'X'“




getModelMethod signature(model = "GenomeModels"):
getModelMethodsignature(model = "GenomeModels")：




getParams signature(model = "GenomeModels"): Returns a
getParamssignature(model = "GenomeModels")：返回




getChr signature(model = "GenomeModels"): Returns the chromosome
getChrsignature(model = "GenomeModels")：返回染色体




getWindowSize signature(model = "GenomeModels"):
getWindowSizesignature(model = "GenomeModels")：




getModelNumbers signature(model = "GenomeModels"):
getModelNumberssignature(model = "GenomeModels")：




topGenes signature(model = "GenomeModels", num     = "numeric"): Returns a vector of given number of names of the genes which have the highest dependency score. With default value
topGenessignature(model = "GenomeModels", num     = "numeric")：返回一个特定的基因，其中有依赖的最高得分的名字数向量。使用默认值




topModels signature(model = "GenomeModels", num     = "numeric"): Returns a list with given number of dependency models
topModelssignature(model = "GenomeModels", num     = "numeric")：返回列表依赖模型




orderGenes signature(model = "GenomeModels"):
orderGenessignature(model = "GenomeModels")：




findModel signature(model = "GenomeModels"):
findModelsignature(model = "GenomeModels")：




as.data.frame signature(x = "GenomeModels"): converts dependency models as a dataframe with eachs row representing a dependency model for one gene.
as.data.framesignature(x = "GenomeModels")：转换为eachs行代表了一个基因的依赖模型dataframe依赖模型。


作者（S）----------Author(s)----------


Olli-Pekka Huovilainen



参见----------See Also----------

For calculation of dependency models for chromosomal arm: screen.cgh.mrna. This class holds a number of GeneDependencyModel in each ChromosomeModels.  For plotting
对于染色体臂依赖模型计算：screen.cgh.mrna。这个类包含的每个ChromosomeModels GeneDependencyModel。绘图

转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。


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