matchSeeds(microRNA)
matchSeeds()所属R语言包：microRNA
A function to match seed regions to sequences.
函数序列匹配种子区。
译者：生物统计家园网 机器人LoveR
描述----------Description----------
Given an input set of seed regions and a set of sequences all locations of the seed regions (exact matches) within the sequences are found.
鉴于种子区域的输入和一组序列集的种子区域内的序列（精确匹配）所有位置被发现。
用法----------Usage----------
matchSeeds(seeds, seqs)
参数----------Arguments----------
参数：seeds
The seeds, or short sequences, to match.
种子，或短序列匹配。
参数：seqs
The sequences to find matches in.
找到匹配英寸的序列
Details
详情----------Details----------
We presume that the problem is an exact matching problem and that all sequences are in the correct orientation for that. If, for example, you start with seed regions from a microRNA (for seeds) and 3'UTR sequences (for seqs), then you would want to reverse complement one of the two sequences. And make sure all sequences are either DNA or RNA.
我们推测，这个问题是一个确切的匹配问题，所有序列中，正确的方向。举例来说，如果你开始从种子区域的microRNA（seeds）和3UTR序列（seqs），那么你将要扭转相辅相成的两个序列之一。并确保所有的序列是DNA或RNA。
Names from either seeds or seqs are propogated, as much as is possible.
从名称或者seeds或seqspropogated，尽可能可能。
值----------Value----------
A list containing one entry for each element of seeds that had at least one match in one entry of seqs. Each element of this list is a named vector containing the elements of seqs that the corresponding seed has an exact match in.
seedsseqs至少有一个匹配项。“中的每个元素包含一个条目列表这个名单中的每个元素是一个名为包含seqs相应的种子，有一个完全匹配英寸的元素的向量
作者（S）----------Author(s)----------
R. Gentleman
参见----------See Also----------
seedRegions
seedRegions
举例----------Examples----------
library(Biostrings)
data(hsSeqs)
data(s3utr)
hSeedReg = seedRegions(hsSeqs)
comphSeed = as.character(reverseComplement(RNAStringSet(hSeedReg)))
comph = RNA2DNA(comphSeed)
mx = matchSeeds(comph, s3utr)
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
注2：由于是机器人自动翻译，难免有不准确之处，使用时仔细对照中、英文内容进行反复理解，可以帮助R语言的学习。
注3：如遇到不准确之处，请在本贴的后面进行回帖，我们会逐渐进行修订。
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发表于 2012-2-26 00:56:30
