maigesRelNetM class, store results of relevance network analysis (comparing two sample types)
maigesRelNetM类,存储相关的网络分析结果(比较两个样品类型)
译者:生物统计家园网 机器人LoveR
描述----------Description----------
This class defines a structure to store the results of relevance network analysis, using a method that compare the correlation values between pairs of genes in two different sample types by a z-transformation. Objects of this type are generated calling the function relNetworkM.
这个类定义了一个结构来存储相关的网络分析的结果,使用方法,比较在两个不同类型的样品对基因之间的相关值的Z变换。产生这种类型的对象调用函数relNetworkM。
Details
详情----------Details----------
Objects of this class are produced by calling the functions relNetworkM over an object of class maiges to search for pairs of genes with altered correlation values between two sample types tested.
这个类的对象是通过调用函数产生relNetworkM了一个对象类maiges搜索对基因改变两个样本测试类型之间的相关性值。
插槽----------Slots----------
W: numeric matrix giving the W values of the genes tested. This information is useful for doing plots representing the
W:数字矩阵,使基因的W值测试。这个信息是代表做图
Corr1: numerical square matrix that store the correlation coefficient values between all pair of genes tested
Corr1:数字方阵,商店对所有的测试基因之间的相关系数的值
Corr2: numerical matrix similar to the previous one,
Corr2:与前一个类似的数值矩阵,
DifP: numerical matrix that store the p-value for the
DifP:数值矩阵存储的P-值
types: character vector giving the names of sample
types:特征向量,使样本的名称
Slabel: string with the sample label used to define
Slabel:用于定义字符串与样品标签
Date: character string giving the date and time that
Date:字符串提供的日期和时间。
V.info: list containg three characters. The first one is a string containing the R version used when the object was created. The second is a char vector with base packages and the last one is another char vector with additional packages and
V.info:列表containg三个大字。第一个是一个字符串,其中包含创建对象时使用的R版本。第二个是基础包炭向量和最后一个字符向量和另一个额外的软件包
方法----------Methods----------
image signature(x = 'maigesRelNetM'): image method for maigesRelNetM class. Display colour representation of
图像signature(x = 'maigesRelNetM'):maigesRelNetM类图像的方法。显示颜色表示