The class 'Les' is used by the package 'les'.
类LES包LES。
类的对象----------Objects from the Class----------
Objects of class 'Les' are constructed by calling the function 'Les'.
通过调用函数LES类LES的对象被构造。
插槽----------Slots----------
pos: Integer vector with probe positions. Provided by
pos:带有探针位置的整数向量。提供
chr: Factor with chromosomes for each probe. Provided
chr:每个探针的染色体因素。提供
lambda: Numeric vector with estimates Lambda for each probe.
lambda:每个探针的Lambda与估计数字的向量。
lambda0: Numeric vector with estimates Lambda0 without the Grenander estimator for each probe. This is used if
lambda0:数字矢量估计没有Lambda0每个探针Grenander估计的。这是使用
se: Numeric vector with standard error from linear
se:数字向量与线性标准误差
nProbes: Integer with number of probes used in fit for
nProbes:适合用于探针数量的整数
pval: Numeric vector with p-values for each
pval:每个p值的数值向量
win: Integer with the window size. Set by the user in
win:窗口大小的整数。在用户设置
weighting: Function with the weighting function used for probe weighting according to position. Set by the user in the
weighting:根据位置探针加权加权函数的功能。在用户设置
grenander: Logical indicating usage of the Grenander
grenander:逻辑表示使用的Grenander
ci: Data frame with the confidence intervals for each
ci:与置信区间为每个数据框
nBoot: Integer with the number of bootstraps to be
nBoot:白手起家的数量的整数是
conf: Numeric with the confidence level. Set by the
conf:数字与置信水平。通过设置
subset: Integer vector with indices of bootstrap
subset:整数向量引导指数
theta: Numeric with the threshold value Theta.
theta:数字与阈值的Theta。
nSigProbes: Integer with the number of estimated
nSigProbes:整数的估计数
regions: Data frame with estimated Loci of Enhanced
regions:数据框位点估计的增强
limit: Numeric with the threshold value for estimation of
limit:数字与估计的阈值
nChr: Integer with the number of chromosomes.
nChr:与染色体数目的整数。
maxGap: Numeric specifying the largest gap allowed in
maxGap:数字指定允许的最大差距
minLength: Integer specifying the minimal number of probes in one region. Set by the user in the 'regions'
minLength:Integer,指定在一个区域的探针数量最少。用户在“区域设置”
minProbes: Integer specifying the minimal number of unique p-values allowed for each fit. Set by the user in the
minProbes:整数,指定允许每个适合的独特的p-值的最小数量。在用户设置
method: Character specifying the method used for
method:指定用于该方法的特征
winSize: Integer vector specifying the window sizes
winSize:整数向量指定的窗口大小
chi2: Matrix containing the chi2 values for different
chi2:矩阵含有不同的χ^ 2值
state: Character vector containing the analysis steps
state:字符向量的分析步骤