Example ChIP-sequencing data with 2 replicates per group obtained in two different dates.
例如芯片序列2的数据复制每个组获得在两个不同的日期。
译者:生物统计家园网 机器人LoveR
描述----------Description----------
This RangedDataList contains a subset of drosophila melanogaster ChIP-sequencing data obtained with the Illumina sequencer. An immuno-precipitated and a control input sample were obtained at two experimental dates (details not provided as this is still unpublished data). In order to save space and let the examples run quicker, only reads mapping to the first 500kb of chr2L are included.
这个RangedDataList包含果蝇芯片测序获得的数据与Illumina的序的一个子集的。免疫沉淀和控制输入样本两个日期(没有提供的细节,因为这仍是未发表的数据)实验获得的。为了节省空间,让示例运行更快,只读取映射到第一500KB chr2L都包括在内。
用法----------Usage----------
data(htSample)
格式----------Format----------
RangedDataList where each element contains reads from a different sample. names(htSample) indicate the group and batch (experimental date) that each sample corresponds to.
RangedDataList,其中每个元素包含的内容从不同的样本。 names(htSample)表明组和批次(实验数据),每个样本对应。
Details
详情----------Details----------
Data was pre-processed using the Illumina pipeline and mapped to the drosophila melanogaster dm3 genome using Bowtie. Only uniquely mapping sequences with at most 2 mismatches in the first 28 bases were kept. See the package vignette for some more details on this dataset.
数据预先使用Illumina的管道处理和映射到果蝇DM3基因组使用领结。最多2在第28碱基的不匹配,只有唯一映射序列被保留。看到这个数据集上的一些细节的包小插曲。