execute(flowWorkspace)
execute()所属R语言包：flowWorkspace
Apply the GatingHierarchy to data, computing population statistics along the way.
的GatingHierarchy的数据，计算一路上的人口统计数字。
译者：生物统计家园网 机器人LoveR
描述----------Description----------
A GatingHierarchy is associated with an fcs file. Calling execute on the GatingHierarchy will load the fcs file, perform compensation and transformation, and calculate the gates as described in the flowJoWorkspace. The method is not meant to be called by the user, but is used internally by flowWorkspace.
一个GatingHierarchy与FCS文件。调用execute上的GatingHierarchy将载入FCS文件，执行补偿和改造，并计算门的flowJoWorkspace的描述。该方法并不意味着由用户调用，但内部由flowWorkspace使用。
用法----------Usage----------
## S4 method for signature 'GatingHierarchy'
execute(hierarchy, cleanup=FALSE,keep.indices=TRUE,isNcdf=FALSE,ncfs=NULL,dataEnvironment=NULL,...)
参数----------Arguments----------
参数：hierarchy
A GatingHierarchy object
一个GatingHierarchy对象
参数：cleanup
cleanup=TRUE|FALSE When not using netcdf, this logical flag indicates whether the data should be retained in memory after processing or whether it should be scrapped to save RAM, keeping only population statistics. If you are loading a large data set, you may want to consider using netcdf, or setting this to TRUE. However, you will not be able to visualize the results.
cleanup=TRUE|FALSE当不使用NetCDF的，这个逻辑标志指示数据是否应该保留在内存中后处理或是否应报废节省内存，只保留人口统计数字。如果您正在加载大型数据集，你可能要考虑使用NetCDF的，或设置为true。但是，您将不能够以可视化的结果。
参数：keep.indices
keep.indices=TRUE|FALSE Logical indicating whether the indices calculated from gating should be stored, or deleted, leaving just their counts.
keep.indices=TRUE|FALSE逻辑门从计算指数是否应存储，或删除，只留下他们的罪名。
参数：isNcdf
TRUE|FALSE a logical flag indicating whether the data (FlowFrame) is saved on the disc in netCDF format.
TRUE|FALSE逻辑的指示标志是否数据（FlowFrame）NetCDF的格式在光盘上保存。
参数：ncfs
ncdfFlowSet a ncdfFlowSet object created by parseWorkspace(when isNcdf is set as TRUE) which contains information of fcs metaData and netCDF file that stores the real data .
ncdfFlowSetncdfFlowSet parseWorkspace（，当isNcdf是设置为TRUE）功能界别的元数据和netCDF文件存储的真实数据，其中包含的信息创建的对象。
参数：dataEnvironment
environment for storing ncdfFlowSet common to all GatingHierarchies in a GatingSet.
environment存储ncdfFlowSet共同在GatingSet的所有GatingHierarchies。
参数：...
Additional arguments. path="character" A file path to the fcs file or files.
额外的参数。 path="character"功能界别的文件或文件的文件路径。
Details
详情----------Details----------
This method is not meant to be called by the user. Rather, passing execute=TRUE to parseWorkspace will execute the gating scheme after the flowJo workspace has been loaded. Cleanup is FALSE by default. This may lead to memory issues when you have lots of data, but it is necessary to visualize the analysis. Netcdf is strongly recommended.
这个方法并不意味着可以由用户调用。相反，通过execute=TRUEparseWorkspace将执行浇注计划后flowJo工作区已被载入。清理默认为false。这可能会导致内存问题，当你有大量的数据，但它是必要的，以可视化的分析。 NetCDF的强烈建议。
值----------Value----------
Returns a GatingHierarchy with calculated population statistics and gate indices.
返回计算的人口统计数字和门指数一个GatingHierarchy。
注意----------Note----------
This function is not meant to be called by the user. Gating of samples in a flowJo workspace can be invoked by passing execute=TRUE to parseWorkspace.
此功能并不意味着必须由用户调用。浇注的样品在flowJo工作区可以通过execute=TRUEparseWorkspace的调用。
作者（S）----------Author(s)----------
Greg Finak <a href="mailto:gfinak@fhcrc.org">gfinak@fhcrc.org</a>
参考文献----------References----------
参见----------See Also----------
parseWorkspace
parseWorkspace
举例----------Examples----------
## Not run: [＃无法运行：]
ws<-openWorkspace("myworkspace.xml");
G<-parseWorkspace(ws,execute=TRUE,isNcdf=FALSE);
## End(Not run)[＃结束（不运行）]
转载请注明:出自 生物统计家园网(http://www.biostatistic.net)。
注：
注1：为了方便大家学习，本文档为生物统计家园网机器人LoveR翻译而成，仅供个人R语言学习参考使用，生物统计家园保留版权。
注2：由于是机器人自动翻译，难免有不准确之处，使用时仔细对照中、英文内容进行反复理解，可以帮助R语言的学习。
注3：如遇到不准确之处，请在本贴的后面进行回帖，我们会逐渐进行修订。
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发表于 2012-2-25 18:15:34
